Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AL354685.2-201ENST00000448218 1447 ntBASIC6.55□□□□□ -1.36
SSU72Q9NP77 EED-206ENST00000527888 1422 ntTSL 2 BASIC6.55□□□□□ -1.36
SSU72Q9NP77 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
SSU72Q9NP77 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.55□□□□□ -1.36
SSU72Q9NP77 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SSU72Q9NP77 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.55□□□□□ -1.36
SSU72Q9NP77 AC090181.3-201ENST00000624777 1514 ntBASIC6.55□□□□□ -1.36
SSU72Q9NP77 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SSU72Q9NP77 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.55□□□□□ -1.36
SSU72Q9NP77 AMD1-201ENST00000368876 3040 ntTSL 5 BASIC6.55□□□□□ -1.36
SSU72Q9NP77 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
SSU72Q9NP77 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSU72Q9NP77 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SSU72Q9NP77 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SSU72Q9NP77 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSU72Q9NP77 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SSU72Q9NP77 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SSU72Q9NP77 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SSU72Q9NP77 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.54□□□□□ -1.36
SSU72Q9NP77 LINC01353-201ENST00000412772 775 ntTSL 3 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 RPS21P8-201ENST00000413365 247 ntBASIC6.54□□□□□ -1.36
SSU72Q9NP77 CYP4F30P-202ENST00000420048 405 ntBASIC6.54□□□□□ -1.36
SSU72Q9NP77 MTCO3P1-205ENST00000422088 832 ntBASIC6.54□□□□□ -1.36
SSU72Q9NP77 AC093107.1-201ENST00000422772 609 ntBASIC6.54□□□□□ -1.36
SSU72Q9NP77 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 RPS25P9-201ENST00000435591 252 ntBASIC6.54□□□□□ -1.36
SSU72Q9NP77 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 UBDP1-202ENST00000457888 382 ntBASIC6.54□□□□□ -1.36
SSU72Q9NP77 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 PNPLA4P1-201ENST00000458328 305 ntBASIC6.54□□□□□ -1.36
SSU72Q9NP77 AC016489.1-201ENST00000461109 375 ntBASIC6.54□□□□□ -1.36
SSU72Q9NP77 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 SLC25A51P1-201ENST00000468432 871 ntBASIC6.54□□□□□ -1.36
SSU72Q9NP77 RPL7P17-201ENST00000470927 724 ntBASIC6.54□□□□□ -1.36
SSU72Q9NP77 RN7SL282P-201ENST00000479676 297 ntBASIC6.54□□□□□ -1.36
SSU72Q9NP77 GAPDHP39-201ENST00000481866 979 ntBASIC6.54□□□□□ -1.36
SSU72Q9NP77 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 RN7SL182P-201ENST00000496499 300 ntBASIC6.54□□□□□ -1.36
SSU72Q9NP77 TMEM150C-203ENST00000508701 566 ntTSL 4 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 EIF3KP1-201ENST00000513279 656 ntBASIC6.54□□□□□ -1.36
SSU72Q9NP77 RN7SKP298-201ENST00000515950 94 ntBASIC6.54□□□□□ -1.36
SSU72Q9NP77 RNU6-314P-201ENST00000516574 104 ntBASIC6.54□□□□□ -1.36
SSU72Q9NP77 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 AL162632.2-201ENST00000553933 399 ntBASIC6.54□□□□□ -1.36
SSU72Q9NP77 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 NIFKP8-201ENST00000560500 874 ntBASIC6.54□□□□□ -1.36
SSU72Q9NP77 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 BNIP3P4-201ENST00000604946 565 ntBASIC6.54□□□□□ -1.36
SSU72Q9NP77 AC024560.3-201ENST00000608482 349 ntBASIC6.54□□□□□ -1.36
SSU72Q9NP77 AL031777.2-201ENST00000611953 196 ntBASIC6.54□□□□□ -1.36
SSU72Q9NP77 AC009704.2-201ENST00000618739 483 ntBASIC6.54□□□□□ -1.36
SSU72Q9NP77 AP001264.1-201ENST00000620602 703 ntBASIC6.54□□□□□ -1.36
SSU72Q9NP77 AC007342.8-201ENST00000623278 678 ntBASIC6.54□□□□□ -1.36
SSU72Q9NP77 AC008626.2-201ENST00000624425 248 ntBASIC6.54□□□□□ -1.36
SSU72Q9NP77 AC012100.3-201ENST00000624738 575 ntBASIC6.54□□□□□ -1.36
SSU72Q9NP77 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 OR52B5P-202ENST00000641118 1110 ntBASIC6.54□□□□□ -1.36
SSU72Q9NP77 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSU72Q9NP77 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 SHQ1P1-201ENST00000437111 1544 ntBASIC6.54□□□□□ -1.36
SSU72Q9NP77 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSU72Q9NP77 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSU72Q9NP77 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
SSU72Q9NP77 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSU72Q9NP77 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSU72Q9NP77 DCAF13P3-201ENST00000561147 1334 ntBASIC6.53□□□□□ -1.36
SSU72Q9NP77 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSU72Q9NP77 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SSU72Q9NP77 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 NSRP1P1-201ENST00000444067 1693 ntBASIC6.53□□□□□ -1.36
SSU72Q9NP77 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.53□□□□□ -1.36
SSU72Q9NP77 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSU72Q9NP77 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms