Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 AL139124.1-201ENST00000609123 421 ntBASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 AC100827.5-201ENST00000615883 426 ntBASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 AL445528.2-201ENST00000620582 470 ntBASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 TMEM30CP-203ENST00000637814 1035 ntBASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TM9SF3Q9HD45 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.34□□□□□ -1.56
TM9SF3Q9HD45 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.34□□□□□ -1.56
TM9SF3Q9HD45 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
TM9SF3Q9HD45 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
TM9SF3Q9HD45 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
TM9SF3Q9HD45 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 AL078621.3-201ENST00000623707 2042 ntBASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 HSPA8P17-201ENST00000427029 1382 ntBASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 U3.28-201ENST00000391249 210 ntBASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 NFYAP1-201ENST00000431953 972 ntBASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 ABCC13-202ENST00000463099 3842 ntBASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 AC009127.1-201ENST00000467090 155 ntBASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 AC024940.3-201ENST00000538551 316 ntBASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 LSM3P2-201ENST00000551246 273 ntBASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 AC011840.5-201ENST00000582125 771 ntBASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 GVINP1-202ENST00000531871 7271 ntBASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 OR4F13P-202ENST00000560066 2054 ntBASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
TM9SF3Q9HD45 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 AC006206.1-201ENST00000544842 3387 ntBASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 MT-RNR1-201ENST00000389680 954 ntBASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 RBMY2QP-201ENST00000429799 1147 ntBASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 AC006466.1-201ENST00000438721 289 ntBASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 Z80107.2-201ENST00000445127 392 ntBASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 RPL7L1P1-201ENST00000448259 785 ntBASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 HIGD1AP8-201ENST00000453927 274 ntBASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 DNAJB5P1-201ENST00000454004 806 ntBASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 AL133244.1-201ENST00000456007 258 ntBASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 RPL5P16-201ENST00000471467 790 ntBASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 AC069304.1-201ENST00000491593 704 ntBASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 AC109464.1-201ENST00000511091 819 ntBASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 RFPL4AP5-201ENST00000514977 504 ntBASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 RN7SKP147-201ENST00000517154 244 ntBASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 AC010632.3-201ENST00000611377 369 ntBASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 AC004241.3-201ENST00000611728 517 ntBASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TM9SF3Q9HD45 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms