Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 RPS6P2-201ENST00000454208 705 ntBASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 RN7SL254P-201ENST00000460609 284 ntBASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 AC004815.1-201ENST00000484185 331 ntBASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 AC109464.1-201ENST00000511091 819 ntBASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 AC108120.2-201ENST00000512973 294 ntBASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 SNORA31.13-201ENST00000516624 135 ntBASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 AC013701.1-201ENST00000522657 465 ntBASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 DUXAP6-201ENST00000553858 601 ntBASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 MIR4701-201ENST00000583094 63 ntBASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 AC015802.2-201ENST00000589690 189 ntBASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 AC110760.3-201ENST00000598794 467 ntBASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 Z99497.2-201ENST00000603634 310 ntBASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 RPL23AP61-201ENST00000623642 466 ntBASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 AL133268.1-201ENST00000405676 1401 ntBASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 AL158152.1-201ENST00000602652 1435 ntBASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 AC112255.1-201ENST00000624070 2493 ntBASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 AC016745.2-201ENST00000608834 3443 ntBASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
AMBRA1Q9C0C7 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 AC120338.1-201ENST00000625074 1541 ntBASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 AC009962.1-201ENST00000567327 3813 ntBASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 AC023490.2-201ENST00000359859 470 ntBASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 RNU4-92P-201ENST00000363783 136 ntBASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 Y_RNA.578-201ENST00000390903 88 ntBASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 RN7SKP144-201ENST00000411108 279 ntBASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 RN7SKP108-201ENST00000411367 328 ntBASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 RPS27AP6-201ENST00000427962 448 ntBASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 AC138761.5-201ENST00000433967 325 ntBASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 MTND4P32-201ENST00000437189 1237 ntBASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 EEF1A1P39-201ENST00000440791 250 ntBASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 MED28P3-201ENST00000444288 531 ntBASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 HMGB3P6-201ENST00000444896 598 ntBASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 ZNF619P1-201ENST00000446539 752 ntBASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 SETP20-201ENST00000457046 852 ntBASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 AC005410.1-202ENST00000460347 485 ntBASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 RPS20P4-201ENST00000461659 355 ntBASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 AC025459.1-201ENST00000504072 156 ntBASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 MTCYBP28-201ENST00000566728 1132 ntBASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 AC069366.1-201ENST00000583159 838 ntBASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 AC011445.2-201ENST00000599274 173 ntBASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.53□□□□□ -1.52
AMBRA1Q9C0C7 AC015726.1-201ENST00000602353 681 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms