Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 RNU6-1222P-201ENST00000384615 107 ntBASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 MIR143-201ENST00000385300 106 ntBASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 ATP5BP1-201ENST00000411980 1574 ntBASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 ZNF512-203ENST00000413371 3703 ntTSL 2 BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 EIF1P3-201ENST00000423841 334 ntBASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 CDY7P-201ENST00000429883 1604 ntBASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 RGS5-217ENST00000451759 835 ntTSL 3 BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 FABP3P2-201ENST00000453169 399 ntBASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 PPIAP27-201ENST00000453800 265 ntBASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 AC073055.1-201ENST00000456901 1621 ntBASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 U8.20-201ENST00000459445 131 ntBASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 RPS10P20-201ENST00000494130 463 ntBASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 ADAM3A-208ENST00000495171 2284 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 CA1-215ENST00000522389 551 ntTSL 3 BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 IGJP1-201ENST00000522682 475 ntBASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 TCF7L2-221ENST00000545257 2160 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 AP001004.1-201ENST00000582468 324 ntBASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 WDR11-AS1-203ENST00000598981 2242 ntTSL 5 BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 CR382285.1-202ENST00000604687 547 ntBASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 AL352984.2-201ENST00000611153 546 ntBASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 AC108479.2-201ENST00000617314 601 ntBASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 AC092999.1-201ENST00000624004 1924 ntBASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 CEACAM7-201ENST00000006724 2489 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 CNTNAP4-202ENST00000377504 4723 ntTSL 5 BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 NR1I2-203ENST00000466380 4306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 ZNF197-205ENST00000396058 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 NSD2-219ENST00000508803 4251 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 ZNF195-230ENST00000620374 3342 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 TBC1D5-219ENST00000446818 3124 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 LINC02208-201ENST00000506769 2803 ntTSL 5 BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 ZNF35-201ENST00000296092 2503 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 HERC3-201ENST00000264345 4764 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 LINC00410-201ENST00000419272 2018 ntTSL 2 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 AL451064.2-201ENST00000623514 1654 ntBASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 OR2A20P-201ENST00000479887 2913 ntBASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 CFAP57-201ENST00000372492 4244 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 MSN-201ENST00000360270 3944 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 AL157777.2-201ENST00000258070 137 ntBASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 RNA5SP88-201ENST00000365560 109 ntBASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 USP32P1-202ENST00000393005 3846 ntTSL 5 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 RPS3AP2-201ENST00000407190 754 ntBASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 AL603766.1-201ENST00000407763 664 ntBASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 Y_RNA.598-201ENST00000410480 95 ntBASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 RN7SKP261-201ENST00000410948 278 ntBASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 AL139128.1-201ENST00000413921 941 ntBASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 B3GALNT1P1-201ENST00000420569 975 ntBASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 MTCYBP8-201ENST00000422855 651 ntBASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 AL356583.2-201ENST00000426536 280 ntBASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 MTND6P18-201ENST00000439477 513 ntBASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 AC010240.2-201ENST00000445363 1205 ntBASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 AL035407.2-201ENST00000454090 378 ntBASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 XACT-201ENST00000468762 497 ntTSL 5 BASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 AC022296.2-201ENST00000512424 202 ntBASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 RNU6-964P-201ENST00000516524 69 ntBASIC7.13□□□□□ -1.27
COL25A1Q9BXS0 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms