Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
MUC4Q99102 NRBF2P2-201ENST00000413087 861 ntBASIC3.81□□□□□ -1.8
MUC4Q99102 RPS23P7-201ENST00000466210 444 ntBASIC3.81□□□□□ -1.8
MUC4Q99102 AC072052.1-201ENST00000496556 306 ntBASIC3.81□□□□□ -1.8
MUC4Q99102 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC3.81□□□□□ -1.8
MUC4Q99102 AC093824.1-201ENST00000508796 343 ntBASIC3.81□□□□□ -1.8
MUC4Q99102 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.81□□□□□ -1.8
MUC4Q99102 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.81□□□□□ -1.8
MUC4Q99102 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.81□□□□□ -1.8
MUC4Q99102 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC3.81□□□□□ -1.8
MUC4Q99102 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC3.81□□□□□ -1.8
MUC4Q99102 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
MUC4Q99102 ATP5J2P6-201ENST00000565203 266 ntBASIC3.81□□□□□ -1.8
MUC4Q99102 AC016839.1-201ENST00000578162 867 ntBASIC3.81□□□□□ -1.8
MUC4Q99102 AC069307.1-201ENST00000602820 447 ntBASIC3.81□□□□□ -1.8
MUC4Q99102 AC009027.1-201ENST00000604510 479 ntBASIC3.81□□□□□ -1.8
MUC4Q99102 Z95327.3-201ENST00000610385 572 ntBASIC3.81□□□□□ -1.8
MUC4Q99102 MIR6837-201ENST00000620884 64 ntBASIC3.81□□□□□ -1.8
MUC4Q99102 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC3.81□□□□□ -1.8
MUC4Q99102 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
MUC4Q99102 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
MUC4Q99102 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
MUC4Q99102 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
MUC4Q99102 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
MUC4Q99102 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
MUC4Q99102 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
MUC4Q99102 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
MUC4Q99102 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
MUC4Q99102 AL672167.1-204ENST00000641875 3017 ntBASIC3.81□□□□□ -1.8
MUC4Q99102 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC3.8□□□□□ -1.8
MUC4Q99102 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
MUC4Q99102 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
MUC4Q99102 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MUC4Q99102 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MUC4Q99102 AL590139.1-201ENST00000416267 400 ntBASIC3.8□□□□□ -1.8
MUC4Q99102 HMGN2P27-201ENST00000427352 270 ntBASIC3.8□□□□□ -1.8
MUC4Q99102 AC090018.1-201ENST00000434369 367 ntBASIC3.8□□□□□ -1.8
MUC4Q99102 GSTM5P1-201ENST00000434751 660 ntBASIC3.8□□□□□ -1.8
MUC4Q99102 AC009220.1-201ENST00000451614 275 ntBASIC3.8□□□□□ -1.8
MUC4Q99102 AC026782.2-201ENST00000510845 636 ntBASIC3.8□□□□□ -1.8
MUC4Q99102 MTND6P2-201ENST00000512226 524 ntBASIC3.8□□□□□ -1.8
MUC4Q99102 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC3.8□□□□□ -1.8
MUC4Q99102 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC3.8□□□□□ -1.8
MUC4Q99102 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC3.8□□□□□ -1.8
MUC4Q99102 BLZF2P-201ENST00000553776 1130 ntBASIC3.8□□□□□ -1.8
MUC4Q99102 OR1F2P-201ENST00000570470 933 ntBASIC3.8□□□□□ -1.8
MUC4Q99102 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC3.8□□□□□ -1.8
MUC4Q99102 AC060766.1-201ENST00000590824 627 ntBASIC3.8□□□□□ -1.8
MUC4Q99102 AC010503.3-201ENST00000594355 540 ntBASIC3.8□□□□□ -1.8
MUC4Q99102 AC005252.1-201ENST00000604518 1063 ntBASIC3.8□□□□□ -1.8
MUC4Q99102 AC011626.1-201ENST00000604710 562 ntBASIC3.8□□□□□ -1.8
MUC4Q99102 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC3.8□□□□□ -1.8
MUC4Q99102 AP005432.2-201ENST00000608162 586 ntBASIC3.8□□□□□ -1.8
MUC4Q99102 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MUC4Q99102 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
MUC4Q99102 LINC01739-205ENST00000641890 573 ntBASIC3.8□□□□□ -1.8
MUC4Q99102 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
MUC4Q99102 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MUC4Q99102 AL731532.2-201ENST00000623542 1953 ntBASIC3.8□□□□□ -1.8
MUC4Q99102 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
MUC4Q99102 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MUC4Q99102 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
MUC4Q99102 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC3.8□□□□□ -1.8
MUC4Q99102 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
MUC4Q99102 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
MUC4Q99102 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
MUC4Q99102 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MUC4Q99102 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MUC4Q99102 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MUC4Q99102 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
MUC4Q99102 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC3.8□□□□□ -1.8
MUC4Q99102 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
MUC4Q99102 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
MUC4Q99102 MAX-203ENST00000341653 330 ntTSL 2 BASIC3.8□□□□□ -1.8
MUC4Q99102 RNA5SP505-201ENST00000364748 108 ntBASIC3.8□□□□□ -1.8
MUC4Q99102 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MUC4Q99102 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
MUC4Q99102 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
MUC4Q99102 HSPA8P15-201ENST00000401676 786 ntBASIC3.8□□□□□ -1.8
MUC4Q99102 RPS16P5-201ENST00000406501 404 ntBASIC3.8□□□□□ -1.8
MUC4Q99102 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC3.8□□□□□ -1.8
MUC4Q99102 DSTNP5-201ENST00000427921 523 ntBASIC3.8□□□□□ -1.8
MUC4Q99102 AL157385.1-201ENST00000446973 268 ntBASIC3.8□□□□□ -1.8
MUC4Q99102 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.8□□□□□ -1.8
MUC4Q99102 TPT1P13-201ENST00000449760 499 ntBASIC3.8□□□□□ -1.8
MUC4Q99102 RN7SL423P-201ENST00000486202 304 ntBASIC3.8□□□□□ -1.8
MUC4Q99102 RN7SL604P-201ENST00000492589 296 ntBASIC3.8□□□□□ -1.8
MUC4Q99102 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.8□□□□□ -1.8
MUC4Q99102 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.8□□□□□ -1.8
MUC4Q99102 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC3.8□□□□□ -1.8
MUC4Q99102 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC3.8□□□□□ -1.8
MUC4Q99102 AC087283.1-201ENST00000604029 1074 ntBASIC3.8□□□□□ -1.8
MUC4Q99102 TAS2R6P-201ENST00000605022 826 ntBASIC3.8□□□□□ -1.8
MUC4Q99102 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC3.8□□□□□ -1.8
MUC4Q99102 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
MUC4Q99102 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
MUC4Q99102 AC011755.1-201ENST00000623763 2049 ntBASIC3.8□□□□□ -1.8
MUC4Q99102 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
MUC4Q99102 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
MUC4Q99102 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms