Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
SNX18Q96RF0 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SNX18Q96RF0 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SNX18Q96RF0 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SNX18Q96RF0 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
SNX18Q96RF0 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SNX18Q96RF0 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.4□□□□□ -1.54
SNX18Q96RF0 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.4□□□□□ -1.54
SNX18Q96RF0 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SNX18Q96RF0 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.4□□□□□ -1.54
SNX18Q96RF0 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.4□□□□□ -1.54
SNX18Q96RF0 RNA5SP156-201ENST00000410250 110 ntBASIC5.4□□□□□ -1.54
SNX18Q96RF0 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.4□□□□□ -1.54
SNX18Q96RF0 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.4□□□□□ -1.54
SNX18Q96RF0 TXNL1P1-201ENST00000429528 554 ntBASIC5.4□□□□□ -1.54
SNX18Q96RF0 AC079807.1-201ENST00000429993 481 ntBASIC5.4□□□□□ -1.54
SNX18Q96RF0 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.4□□□□□ -1.54
SNX18Q96RF0 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.4□□□□□ -1.54
SNX18Q96RF0 PA2G4P6-201ENST00000438325 1197 ntBASIC5.4□□□□□ -1.54
SNX18Q96RF0 MTCYBP12-201ENST00000440559 1134 ntBASIC5.4□□□□□ -1.54
SNX18Q96RF0 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.4□□□□□ -1.54
SNX18Q96RF0 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.4□□□□□ -1.54
SNX18Q96RF0 HMGN1P2-201ENST00000445197 310 ntBASIC5.4□□□□□ -1.54
SNX18Q96RF0 AL590004.3-202ENST00000445883 451 ntBASIC5.4□□□□□ -1.54
SNX18Q96RF0 AC023271.1-201ENST00000445936 1090 ntBASIC5.4□□□□□ -1.54
SNX18Q96RF0 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.4□□□□□ -1.54
SNX18Q96RF0 RN7SL197P-201ENST00000466981 299 ntBASIC5.4□□□□□ -1.54
SNX18Q96RF0 AC023245.1-201ENST00000468501 517 ntBASIC5.4□□□□□ -1.54
SNX18Q96RF0 AC107398.1-201ENST00000486904 505 ntBASIC5.4□□□□□ -1.54
SNX18Q96RF0 AP002453.1-201ENST00000492327 668 ntBASIC5.4□□□□□ -1.54
SNX18Q96RF0 RPL21P131-201ENST00000497298 483 ntBASIC5.4□□□□□ -1.54
SNX18Q96RF0 RPSAP51-201ENST00000497462 645 ntBASIC5.4□□□□□ -1.54
SNX18Q96RF0 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SNX18Q96RF0 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.4□□□□□ -1.54
SNX18Q96RF0 TOMM22P4-201ENST00000511318 336 ntBASIC5.4□□□□□ -1.54
SNX18Q96RF0 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SNX18Q96RF0 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.4□□□□□ -1.54
SNX18Q96RF0 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.4□□□□□ -1.54
SNX18Q96RF0 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.4□□□□□ -1.54
SNX18Q96RF0 AC036111.2-201ENST00000533247 901 ntBASIC5.4□□□□□ -1.54
SNX18Q96RF0 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SNX18Q96RF0 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.4□□□□□ -1.54
SNX18Q96RF0 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SNX18Q96RF0 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.4□□□□□ -1.54
SNX18Q96RF0 FAM106CP-201ENST00000582212 507 ntBASIC5.4□□□□□ -1.54
SNX18Q96RF0 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.4□□□□□ -1.54
SNX18Q96RF0 RN7SL622P-201ENST00000585292 275 ntBASIC5.4□□□□□ -1.54
SNX18Q96RF0 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.4□□□□□ -1.54
SNX18Q96RF0 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.4□□□□□ -1.54
SNX18Q96RF0 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.4□□□□□ -1.54
SNX18Q96RF0 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.4□□□□□ -1.54
SNX18Q96RF0 Z95327.3-201ENST00000610385 572 ntBASIC5.4□□□□□ -1.54
SNX18Q96RF0 AC096861.1-201ENST00000616652 240 ntBASIC5.4□□□□□ -1.54
SNX18Q96RF0 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.4□□□□□ -1.54
SNX18Q96RF0 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.4□□□□□ -1.54
SNX18Q96RF0 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SNX18Q96RF0 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SNX18Q96RF0 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
SNX18Q96RF0 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SNX18Q96RF0 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
SNX18Q96RF0 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
SNX18Q96RF0 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SNX18Q96RF0 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
SNX18Q96RF0 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SNX18Q96RF0 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
SNX18Q96RF0 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.39□□□□□ -1.55
SNX18Q96RF0 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SNX18Q96RF0 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SNX18Q96RF0 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.39□□□□□ -1.55
SNX18Q96RF0 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNX18Q96RF0 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNX18Q96RF0 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNX18Q96RF0 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNX18Q96RF0 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SNX18Q96RF0 AL672167.2-201ENST00000377164 879 ntBASIC5.39□□□□□ -1.55
SNX18Q96RF0 U6.112-201ENST00000384129 70 ntBASIC5.39□□□□□ -1.55
SNX18Q96RF0 AL034403.1-201ENST00000399414 885 ntBASIC5.39□□□□□ -1.55
SNX18Q96RF0 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNX18Q96RF0 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
SNX18Q96RF0 RNU4-22P-201ENST00000411058 166 ntBASIC5.39□□□□□ -1.55
SNX18Q96RF0 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.39□□□□□ -1.55
SNX18Q96RF0 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.39□□□□□ -1.55
SNX18Q96RF0 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SNX18Q96RF0 RPL35AP31-201ENST00000418340 337 ntBASIC5.39□□□□□ -1.55
SNX18Q96RF0 RPA2P2-201ENST00000419698 796 ntBASIC5.39□□□□□ -1.55
SNX18Q96RF0 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.39□□□□□ -1.55
SNX18Q96RF0 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.39□□□□□ -1.55
SNX18Q96RF0 RPL12P12-201ENST00000424633 501 ntBASIC5.39□□□□□ -1.55
SNX18Q96RF0 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNX18Q96RF0 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.39□□□□□ -1.55
SNX18Q96RF0 AC110602.1-201ENST00000437414 318 ntBASIC5.39□□□□□ -1.55
SNX18Q96RF0 AMYP1-201ENST00000440059 1023 ntBASIC5.39□□□□□ -1.55
SNX18Q96RF0 TRIM60P16-201ENST00000444048 694 ntBASIC5.39□□□□□ -1.55
SNX18Q96RF0 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.39□□□□□ -1.55
SNX18Q96RF0 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.39□□□□□ -1.55
SNX18Q96RF0 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.39□□□□□ -1.55
SNX18Q96RF0 AC023424.1-201ENST00000496058 459 ntBASIC5.39□□□□□ -1.55
SNX18Q96RF0 AC026414.1-201ENST00000504046 698 ntBASIC5.39□□□□□ -1.55
SNX18Q96RF0 GLUD1P3-202ENST00000508551 200 ntBASIC5.39□□□□□ -1.55
SNX18Q96RF0 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms