Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS50Q96JG6 AC132825.1-201ENST00000463573 2247 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS50Q96JG6 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VPS50Q96JG6 MIR323A-201ENST00000362199 86 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 RNA5SP477-201ENST00000362639 119 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VPS50Q96JG6 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS50Q96JG6 RNU6-1320P-201ENST00000390838 107 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 RNU6-1269P-201ENST00000391139 107 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 ATF1P1-201ENST00000406040 927 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 AC002524.1-201ENST00000411687 547 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS50Q96JG6 SDHDP6-201ENST00000414693 480 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 METTL15P3-201ENST00000415522 1221 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 PTCD2P2-201ENST00000415579 1095 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS50Q96JG6 BTF3P9-201ENST00000418784 283 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 BX284632.2-201ENST00000421091 399 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 PTP4A1P7-201ENST00000423476 514 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 AC113412.1-201ENST00000425840 504 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 AC092447.3-201ENST00000426027 686 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
VPS50Q96JG6 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.66□□□□□ -1.5
VPS50Q96JG6 Z84478.1-201ENST00000438230 1219 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 VN1R110P-201ENST00000438988 971 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.66□□□□□ -1.5
VPS50Q96JG6 ZNF619P1-201ENST00000446539 752 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VPS50Q96JG6 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS50Q96JG6 AL445665.1-202ENST00000452436 324 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS50Q96JG6 CST12P-201ENST00000457644 362 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 ACA64.4-201ENST00000459070 127 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 RNU6-599P-201ENST00000459383 107 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 RNU6-1193P-201ENST00000459461 107 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 AC011476.1-201ENST00000466725 307 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 RPS17P11-201ENST00000474297 293 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 AC020779.1-201ENST00000478757 796 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 AC116562.1-201ENST00000485355 781 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 RPL23AP40-201ENST00000487630 390 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.66□□□□□ -1.5
VPS50Q96JG6 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS50Q96JG6 TMEM97P2-201ENST00000517841 403 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 BUD31P1-201ENST00000521828 359 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS50Q96JG6 AP000648.1-201ENST00000529682 397 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS50Q96JG6 AC139103.1-201ENST00000534696 1030 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 AC068993.1-201ENST00000546724 589 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS50Q96JG6 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.66□□□□□ -1.5
VPS50Q96JG6 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.66□□□□□ -1.5
VPS50Q96JG6 AP005119.1-201ENST00000580956 292 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 AC124283.4-201ENST00000581815 456 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS50Q96JG6 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS50Q96JG6 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.66□□□□□ -1.5
VPS50Q96JG6 AC099785.1-201ENST00000605697 437 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 AL031601.1-201ENST00000605702 394 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 FAM72A-208ENST00000607379 1139 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.66□□□□□ -1.5
VPS50Q96JG6 AC009159.2-201ENST00000617603 606 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 RNU6-368P-201ENST00000620928 107 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 RNU6-538P-201ENST00000622329 107 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 AC005618.4-201ENST00000625053 554 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
VPS50Q96JG6 AC006927.2-201ENST00000639256 389 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
VPS50Q96JG6 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.66□□□□□ -1.5
VPS50Q96JG6 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS50Q96JG6 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS50Q96JG6 AC027088.4-201ENST00000611559 1947 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
VPS50Q96JG6 AC018809.2-201ENST00000602436 3823 ntBASIC5.65□□□□□ -1.5
VPS50Q96JG6 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
VPS50Q96JG6 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
VPS50Q96JG6 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VPS50Q96JG6 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VPS50Q96JG6 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
VPS50Q96JG6 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VPS50Q96JG6 RNA5SP375-201ENST00000362975 119 ntBASIC5.65□□□□□ -1.5
VPS50Q96JG6 RNU5B-4P-201ENST00000363508 111 ntBASIC5.65□□□□□ -1.5
VPS50Q96JG6 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.65□□□□□ -1.5
VPS50Q96JG6 RNA5SP284-201ENST00000384547 118 ntBASIC5.65□□□□□ -1.5
VPS50Q96JG6 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
VPS50Q96JG6 SNORA17A-201ENST00000391185 133 ntBASIC5.65□□□□□ -1.5
VPS50Q96JG6 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS50Q96JG6 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.65□□□□□ -1.5
VPS50Q96JG6 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS50Q96JG6 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS50Q96JG6 AC006065.1-201ENST00000422539 802 ntBASIC5.65□□□□□ -1.5
VPS50Q96JG6 RPS7P2-201ENST00000435134 607 ntBASIC5.65□□□□□ -1.5
VPS50Q96JG6 AL512605.1-202ENST00000441919 381 ntBASIC5.65□□□□□ -1.5
VPS50Q96JG6 AL359955.2-201ENST00000445380 353 ntBASIC5.65□□□□□ -1.5
VPS50Q96JG6 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.65□□□□□ -1.5
VPS50Q96JG6 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.65□□□□□ -1.5
VPS50Q96JG6 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms