Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HPS3Q969F9 AC022215.1-201ENST00000481770 362 ntBASIC6.25□□□□□ -1.41
HPS3Q969F9 EIF1P7-201ENST00000487533 337 ntBASIC6.25□□□□□ -1.41
HPS3Q969F9 RPL7P51-201ENST00000490532 749 ntBASIC6.25□□□□□ -1.41
HPS3Q969F9 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.25□□□□□ -1.41
HPS3Q969F9 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.25□□□□□ -1.41
HPS3Q969F9 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC6.25□□□□□ -1.41
HPS3Q969F9 AC074255.1-201ENST00000511259 501 ntBASIC6.25□□□□□ -1.41
HPS3Q969F9 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.25□□□□□ -1.41
HPS3Q969F9 IGKV3D-34-201ENST00000522638 302 ntBASIC6.25□□□□□ -1.41
HPS3Q969F9 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.25□□□□□ -1.41
HPS3Q969F9 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC6.25□□□□□ -1.41
HPS3Q969F9 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.25□□□□□ -1.41
HPS3Q969F9 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC6.25□□□□□ -1.41
HPS3Q969F9 MTCO2P2-201ENST00000591258 225 ntBASIC6.25□□□□□ -1.41
HPS3Q969F9 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.25□□□□□ -1.41
HPS3Q969F9 BNIP3P38-201ENST00000601117 544 ntBASIC6.25□□□□□ -1.41
HPS3Q969F9 AC100767.2-201ENST00000604840 693 ntBASIC6.25□□□□□ -1.41
HPS3Q969F9 AC015712.7-201ENST00000615211 635 ntBASIC6.25□□□□□ -1.41
HPS3Q969F9 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.25□□□□□ -1.41
HPS3Q969F9 AC087565.3-203ENST00000641018 837 ntBASIC6.25□□□□□ -1.41
HPS3Q969F9 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HPS3Q969F9 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
HPS3Q969F9 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HPS3Q969F9 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
HPS3Q969F9 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HPS3Q969F9 AC007342.5-201ENST00000571340 2142 ntBASIC6.25□□□□□ -1.41
HPS3Q969F9 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.25□□□□□ -1.41
HPS3Q969F9 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HPS3Q969F9 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HPS3Q969F9 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HPS3Q969F9 AC144833.1-201ENST00000567953 4089 ntBASIC6.25□□□□□ -1.41
HPS3Q969F9 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HPS3Q969F9 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
HPS3Q969F9 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HPS3Q969F9 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.24□□□□□ -1.41
HPS3Q969F9 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
HPS3Q969F9 HMGB1P13-201ENST00000406019 642 ntBASIC6.24□□□□□ -1.41
HPS3Q969F9 RNGTTP1-201ENST00000420965 728 ntBASIC6.24□□□□□ -1.41
HPS3Q969F9 RPL23AP4-201ENST00000427757 463 ntBASIC6.24□□□□□ -1.41
HPS3Q969F9 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC6.24□□□□□ -1.41
HPS3Q969F9 AC006335.2-201ENST00000437993 330 ntBASIC6.24□□□□□ -1.41
HPS3Q969F9 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.24□□□□□ -1.41
HPS3Q969F9 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC6.24□□□□□ -1.41
HPS3Q969F9 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.24□□□□□ -1.41
HPS3Q969F9 AC092685.1-201ENST00000447960 1243 ntBASIC6.24□□□□□ -1.41
HPS3Q969F9 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.24□□□□□ -1.41
HPS3Q969F9 RPS20P4-201ENST00000461659 355 ntBASIC6.24□□□□□ -1.41
HPS3Q969F9 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HPS3Q969F9 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.24□□□□□ -1.41
HPS3Q969F9 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.24□□□□□ -1.41
HPS3Q969F9 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC6.24□□□□□ -1.41
HPS3Q969F9 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC6.24□□□□□ -1.41
HPS3Q969F9 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.24□□□□□ -1.41
HPS3Q969F9 MTHFD2P4-201ENST00000515074 1025 ntBASIC6.24□□□□□ -1.41
HPS3Q969F9 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.24□□□□□ -1.41
HPS3Q969F9 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC6.24□□□□□ -1.41
HPS3Q969F9 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.24□□□□□ -1.41
HPS3Q969F9 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.24□□□□□ -1.41
HPS3Q969F9 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.24□□□□□ -1.41
HPS3Q969F9 AC012146.2-201ENST00000576545 416 ntBASIC6.24□□□□□ -1.41
HPS3Q969F9 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.24□□□□□ -1.41
HPS3Q969F9 AC018618.2-201ENST00000604770 446 ntBASIC6.24□□□□□ -1.41
HPS3Q969F9 AC090607.5-201ENST00000615692 224 ntBASIC6.24□□□□□ -1.41
HPS3Q969F9 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC6.24□□□□□ -1.41
HPS3Q969F9 AC079776.5-201ENST00000641920 211 ntBASIC6.24□□□□□ -1.41
HPS3Q969F9 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
HPS3Q969F9 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HPS3Q969F9 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
HPS3Q969F9 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HPS3Q969F9 UGT2B26P-201ENST00000508672 1613 ntBASIC6.24□□□□□ -1.41
HPS3Q969F9 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
HPS3Q969F9 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.24□□□□□ -1.41
HPS3Q969F9 AC106872.5-201ENST00000508856 1416 ntBASIC6.24□□□□□ -1.41
HPS3Q969F9 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.24□□□□□ -1.41
HPS3Q969F9 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.24□□□□□ -1.41
HPS3Q969F9 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
HPS3Q969F9 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.24□□□□□ -1.41
HPS3Q969F9 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
HPS3Q969F9 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
HPS3Q969F9 ZNF733P-202ENST00000444809 1573 ntBASIC6.23□□□□□ -1.41
HPS3Q969F9 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HPS3Q969F9 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.23□□□□□ -1.41
HPS3Q969F9 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HPS3Q969F9 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6.23□□□□□ -1.41
HPS3Q969F9 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HPS3Q969F9 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
HPS3Q969F9 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HPS3Q969F9 AL121886.1-201ENST00000358609 435 ntBASIC6.23□□□□□ -1.41
HPS3Q969F9 MIR375-201ENST00000362103 64 ntBASIC6.23□□□□□ -1.41
HPS3Q969F9 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HPS3Q969F9 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.23□□□□□ -1.41
HPS3Q969F9 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC6.23□□□□□ -1.41
HPS3Q969F9 ZNF602P-201ENST00000405929 924 ntBASIC6.23□□□□□ -1.41
HPS3Q969F9 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.23□□□□□ -1.41
HPS3Q969F9 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.23□□□□□ -1.41
HPS3Q969F9 AC099670.2-201ENST00000435130 321 ntBASIC6.23□□□□□ -1.41
HPS3Q969F9 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.23□□□□□ -1.41
HPS3Q969F9 AC073109.1-201ENST00000445066 978 ntBASIC6.23□□□□□ -1.41
HPS3Q969F9 RBMY2TP-201ENST00000451162 947 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms