Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 AP000776.1-201ENST00000530032 1663 ntBASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 TPMTP3-201ENST00000411928 735 ntBASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 Z97055.1-201ENST00000419730 712 ntBASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 CYCSP46-201ENST00000423569 204 ntBASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 PNRC2P1-201ENST00000423940 420 ntBASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 AC079807.1-201ENST00000429993 481 ntBASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 AC007679.3-201ENST00000434035 414 ntBASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 RPS10P18-201ENST00000442662 495 ntBASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 ANKRD30BP3-201ENST00000444850 1070 ntBASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 NFU1P2-201ENST00000448700 469 ntBASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 ALG13-211ENST00000473389 693 ntTSL 2 BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 TMED11P-201ENST00000479478 690 ntBASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 GM2AP2-201ENST00000491764 562 ntBASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 HNRNPKP5-201ENST00000515300 253 ntBASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 RNA5SP418-201ENST00000515951 117 ntBASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 RNU6-964P-201ENST00000516524 69 ntBASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 AP001207.1-201ENST00000524051 481 ntBASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 NTS-203ENST00000551529 801 ntTSL 3 BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 UBE2FP2-201ENST00000566646 462 ntBASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 AC106785.4-201ENST00000569492 412 ntBASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 AL589863.1-201ENST00000595383 631 ntBASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 AC018714.1-201ENST00000605028 208 ntBASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 AL365503.1-201ENST00000605247 905 ntBASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 AC097505.1-201ENST00000610199 565 ntBASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 MIR6861-201ENST00000618657 64 ntBASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 AP001052.1-201ENST00000626421 99 ntBASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 AC017104.4-201ENST00000636283 1592 ntBASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.85□□□□□ -1.31
SHKBP1Q8TBC3 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 RN7SKP15-201ENST00000364742 309 ntBASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 RN7SKP240-201ENST00000410583 375 ntBASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 EEF1A1P40-201ENST00000412883 573 ntBASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 AL035422.1-201ENST00000414193 397 ntBASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 AC009237.5-201ENST00000414271 501 ntBASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 RPL21P50-201ENST00000417698 477 ntBASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 AF228730.4-201ENST00000421457 183 ntBASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 OSTCP4-201ENST00000424397 449 ntBASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 DUTP4-201ENST00000424782 475 ntBASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 NANOGNBP1-201ENST00000448444 480 ntBASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 GTF2IP12-201ENST00000456547 356 ntBASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC6.84□□□□□ -1.31
SHKBP1Q8TBC3 MTND3P22-201ENST00000510932 243 ntBASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms