Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 EI24P3-201ENST00000399046 1062 ntBASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 AL109941.1-201ENST00000401925 229 ntBASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 RPL10P10-201ENST00000403509 664 ntBASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 PCNPP4-201ENST00000414817 517 ntBASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 AC017078.1-201ENST00000416146 368 ntBASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 AC092647.2-201ENST00000452998 253 ntBASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 AC079168.1-201ENST00000458741 345 ntBASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 IGBP1P4-201ENST00000503202 879 ntBASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 AC004980.4-201ENST00000513375 203 ntBASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 SCARNA20.4-201ENST00000516969 131 ntBASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 AP002373.2-201ENST00000541631 1060 ntBASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 AL136295.6-201ENST00000610486 658 ntBASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 AC244107.2-201ENST00000611773 76 ntBASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 AL049539.1-201ENST00000611964 459 ntBASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 PCAT14-202ENST00000627127 3935 ntBASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLDND2Q8NHS1 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 STX3-208ENST00000641815 3236 ntBASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 AC083843.2-201ENST00000568248 6253 ntBASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 RN7SKP103-201ENST00000363848 320 ntBASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 CHMP1B2P-201ENST00000399581 597 ntBASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 AC104333.2-201ENST00000422630 192 ntBASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 AC002456.2-201ENST00000509356 380 ntBASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 HMGN1P9-201ENST00000515212 298 ntBASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 AP001922.4-201ENST00000526967 290 ntBASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 EIF4A2P5-201ENST00000529914 499 ntBASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 MIR4433B-201ENST00000581329 102 ntBASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 AC011840.5-201ENST00000582125 771 ntBASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 EIF3FP1-201ENST00000613970 806 ntBASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 AP001784.1-201ENST00000624107 428 ntBASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 AP003400.3-201ENST00000624904 346 ntBASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 AL353662.3-201ENST00000625131 237 ntBASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 AC135068.12-201ENST00000637370 931 ntBASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 AC073869.10-201ENST00000642016 354 ntBASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 SCARNA15-201ENST00000607520 4325 ntBASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDND2Q8NHS1 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLDND2Q8NHS1 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CLDND2Q8NHS1 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
CLDND2Q8NHS1 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.36□□□□□ -1.71
CLDND2Q8NHS1 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLDND2Q8NHS1 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms