Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC7.63□□□□□ -1.19
VPS8Q8N3P4 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC7.63□□□□□ -1.19
VPS8Q8N3P4 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC7.63□□□□□ -1.19
VPS8Q8N3P4 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC7.63□□□□□ -1.19
VPS8Q8N3P4 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC7.63□□□□□ -1.19
VPS8Q8N3P4 MRPS21P9-201ENST00000571150 257 ntBASIC7.63□□□□□ -1.19
VPS8Q8N3P4 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC7.63□□□□□ -1.19
VPS8Q8N3P4 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
VPS8Q8N3P4 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
VPS8Q8N3P4 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC7.63□□□□□ -1.19
VPS8Q8N3P4 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC7.63□□□□□ -1.19
VPS8Q8N3P4 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
VPS8Q8N3P4 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
VPS8Q8N3P4 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC7.63□□□□□ -1.19
VPS8Q8N3P4 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
VPS8Q8N3P4 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
VPS8Q8N3P4 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
VPS8Q8N3P4 SNORA56-201ENST00000383966 129 ntBASIC7.62□□□□□ -1.19
VPS8Q8N3P4 RNA5SP187-201ENST00000384400 119 ntBASIC7.62□□□□□ -1.19
VPS8Q8N3P4 ARL4AP5-201ENST00000404372 599 ntBASIC7.62□□□□□ -1.19
VPS8Q8N3P4 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC7.62□□□□□ -1.19
VPS8Q8N3P4 NRBF2P3-201ENST00000432731 865 ntBASIC7.62□□□□□ -1.19
VPS8Q8N3P4 RN7SL558P-201ENST00000497468 299 ntBASIC7.62□□□□□ -1.19
VPS8Q8N3P4 SOX5P1-201ENST00000524155 1127 ntBASIC7.62□□□□□ -1.19
VPS8Q8N3P4 AC127024.5-201ENST00000580085 462 ntBASIC7.62□□□□□ -1.19
VPS8Q8N3P4 AC022726.1-201ENST00000587475 207 ntBASIC7.62□□□□□ -1.19
VPS8Q8N3P4 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
VPS8Q8N3P4 AC007382.1-201ENST00000624376 2618 ntBASIC7.62□□□□□ -1.19
VPS8Q8N3P4 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
VPS8Q8N3P4 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
VPS8Q8N3P4 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
VPS8Q8N3P4 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC7.62□□□□□ -1.19
VPS8Q8N3P4 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC7.62□□□□□ -1.19
VPS8Q8N3P4 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
VPS8Q8N3P4 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC7.62□□□□□ -1.19
VPS8Q8N3P4 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
VPS8Q8N3P4 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
VPS8Q8N3P4 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC7.62□□□□□ -1.19
VPS8Q8N3P4 TLK1P1-201ENST00000456760 2440 ntBASIC7.62□□□□□ -1.19
VPS8Q8N3P4 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
VPS8Q8N3P4 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
VPS8Q8N3P4 U3.35-201ENST00000408405 208 ntBASIC7.61□□□□□ -1.19
VPS8Q8N3P4 ZDHHC20P1-204ENST00000435787 423 ntBASIC7.61□□□□□ -1.19
VPS8Q8N3P4 AC005154.2-201ENST00000438110 379 ntBASIC7.61□□□□□ -1.19
VPS8Q8N3P4 AC006466.1-201ENST00000438721 289 ntBASIC7.61□□□□□ -1.19
VPS8Q8N3P4 AC011753.3-201ENST00000443436 406 ntBASIC7.61□□□□□ -1.19
VPS8Q8N3P4 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC7.61□□□□□ -1.19
VPS8Q8N3P4 AC234781.3-201ENST00000452540 973 ntBASIC7.61□□□□□ -1.19
VPS8Q8N3P4 RN7SL860P-201ENST00000473738 223 ntBASIC7.61□□□□□ -1.19
VPS8Q8N3P4 Y_RNA.719-201ENST00000517156 106 ntBASIC7.61□□□□□ -1.19
VPS8Q8N3P4 OR5M2P-201ENST00000529003 936 ntBASIC7.61□□□□□ -1.19
VPS8Q8N3P4 AL390726.5-202ENST00000564800 256 ntBASIC7.61□□□□□ -1.19
VPS8Q8N3P4 AC015914.2-201ENST00000618167 288 ntBASIC7.61□□□□□ -1.19
VPS8Q8N3P4 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
VPS8Q8N3P4 USP8-204ENST00000425032 3559 ntTSL 2 BASIC7.61□□□□□ -1.19
VPS8Q8N3P4 DHX9P1-201ENST00000436565 3076 ntBASIC7.61□□□□□ -1.19
VPS8Q8N3P4 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
VPS8Q8N3P4 AC100778.3-201ENST00000580060 1750 ntBASIC7.61□□□□□ -1.19
VPS8Q8N3P4 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
VPS8Q8N3P4 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
VPS8Q8N3P4 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
VPS8Q8N3P4 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
VPS8Q8N3P4 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC7.61□□□□□ -1.19
VPS8Q8N3P4 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC7.61□□□□□ -1.19
VPS8Q8N3P4 AC073264.2-201ENST00000448886 166 ntBASIC7.61□□□□□ -1.19
VPS8Q8N3P4 RPS5P7-201ENST00000456664 608 ntBASIC7.61□□□□□ -1.19
VPS8Q8N3P4 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC7.61□□□□□ -1.19
VPS8Q8N3P4 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC7.61□□□□□ -1.19
VPS8Q8N3P4 RNU6-709P-201ENST00000517257 104 ntBASIC7.61□□□□□ -1.19
VPS8Q8N3P4 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC7.61□□□□□ -1.19
VPS8Q8N3P4 MIR4270-201ENST00000581799 70 ntBASIC7.61□□□□□ -1.19
VPS8Q8N3P4 MIR6780A-201ENST00000615089 68 ntBASIC7.61□□□□□ -1.19
VPS8Q8N3P4 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC7.61□□□□□ -1.19
VPS8Q8N3P4 uc_338.18-201ENST00000615451 175 ntBASIC7.61□□□□□ -1.19
VPS8Q8N3P4 AL442639.1-201ENST00000625030 1899 ntBASIC7.61□□□□□ -1.19
VPS8Q8N3P4 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
VPS8Q8N3P4 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC7.6□□□□□ -1.19
VPS8Q8N3P4 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
VPS8Q8N3P4 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC7.6□□□□□ -1.19
VPS8Q8N3P4 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
VPS8Q8N3P4 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
VPS8Q8N3P4 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
VPS8Q8N3P4 NIPA2P1-201ENST00000426223 976 ntBASIC7.6□□□□□ -1.19
VPS8Q8N3P4 RNU2-30P-201ENST00000516209 141 ntBASIC7.6□□□□□ -1.19
VPS8Q8N3P4 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
VPS8Q8N3P4 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC7.6□□□□□ -1.19
VPS8Q8N3P4 NELL2-211ENST00000548826 559 ntTSL 2 BASIC7.6□□□□□ -1.19
VPS8Q8N3P4 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC7.6□□□□□ -1.19
VPS8Q8N3P4 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
VPS8Q8N3P4 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC7.59□□□□□ -1.19
VPS8Q8N3P4 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC7.59□□□□□ -1.19
VPS8Q8N3P4 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC7.59□□□□□ -1.19
VPS8Q8N3P4 ZFRP1-201ENST00000457579 2970 ntBASIC7.59□□□□□ -1.19
VPS8Q8N3P4 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
VPS8Q8N3P4 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
VPS8Q8N3P4 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
VPS8Q8N3P4 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC7.59□□□□□ -1.19
VPS8Q8N3P4 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC7.59□□□□□ -1.19
VPS8Q8N3P4 AL590240.1-201ENST00000334118 313 ntBASIC7.59□□□□□ -1.19
VPS8Q8N3P4 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms