Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 RNU6-729P-201ENST00000384399 107 ntBASIC5.98□□□□□ -1.45
HERC6Q8IVU3 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 NPM1P37-201ENST00000403105 874 ntBASIC5.98□□□□□ -1.45
HERC6Q8IVU3 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 AC093655.2-201ENST00000425735 631 ntBASIC5.98□□□□□ -1.45
HERC6Q8IVU3 RBMY2QP-201ENST00000429799 1147 ntBASIC5.98□□□□□ -1.45
HERC6Q8IVU3 AC092647.3-201ENST00000443044 633 ntBASIC5.98□□□□□ -1.45
HERC6Q8IVU3 AC092106.1-201ENST00000444291 373 ntBASIC5.98□□□□□ -1.45
HERC6Q8IVU3 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 AC069277.2-201ENST00000454211 432 ntBASIC5.98□□□□□ -1.45
HERC6Q8IVU3 AC006463.2-201ENST00000473326 348 ntBASIC5.98□□□□□ -1.45
HERC6Q8IVU3 AC108729.2-201ENST00000476543 840 ntBASIC5.98□□□□□ -1.45
HERC6Q8IVU3 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 AC091544.1-201ENST00000484702 348 ntBASIC5.98□□□□□ -1.45
HERC6Q8IVU3 TRBV5-2-201ENST00000489095 273 ntBASIC5.98□□□□□ -1.45
HERC6Q8IVU3 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 BRD9P1-201ENST00000529855 560 ntBASIC5.98□□□□□ -1.45
HERC6Q8IVU3 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 AL121594.2-201ENST00000541658 472 ntBASIC5.98□□□□□ -1.45
HERC6Q8IVU3 AP000619.2-201ENST00000546014 969 ntBASIC5.98□□□□□ -1.45
HERC6Q8IVU3 AC087888.1-201ENST00000550884 1254 ntBASIC5.98□□□□□ -1.45
HERC6Q8IVU3 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 AGGF1P7-201ENST00000562369 913 ntBASIC5.98□□□□□ -1.45
HERC6Q8IVU3 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 MIR3934-201ENST00000579806 107 ntBASIC5.98□□□□□ -1.45
HERC6Q8IVU3 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 AC068020.1-201ENST00000594215 661 ntBASIC5.98□□□□□ -1.45
HERC6Q8IVU3 AC130352.1-201ENST00000602979 661 ntBASIC5.98□□□□□ -1.45
HERC6Q8IVU3 AC004775.1-201ENST00000607389 753 ntBASIC5.98□□□□□ -1.45
HERC6Q8IVU3 AC109583.2-201ENST00000617367 129 ntBASIC5.98□□□□□ -1.45
HERC6Q8IVU3 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 AC000095.2-202ENST00000637415 154 ntBASIC5.98□□□□□ -1.45
HERC6Q8IVU3 AC074101.1-201ENST00000637861 241 ntBASIC5.98□□□□□ -1.45
HERC6Q8IVU3 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.97□□□□□ -1.45
HERC6Q8IVU3 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.97□□□□□ -1.45
HERC6Q8IVU3 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.97□□□□□ -1.45
HERC6Q8IVU3 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HERC6Q8IVU3 MFSD8-239ENST00000641590 2479 ntBASIC5.97□□□□□ -1.45
HERC6Q8IVU3 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.97□□□□□ -1.45
HERC6Q8IVU3 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
HERC6Q8IVU3 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HERC6Q8IVU3 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.97□□□□□ -1.45
HERC6Q8IVU3 RNU1-149P-201ENST00000390870 161 ntBASIC5.97□□□□□ -1.45
HERC6Q8IVU3 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HERC6Q8IVU3 AL133388.1-201ENST00000404509 287 ntBASIC5.97□□□□□ -1.45
HERC6Q8IVU3 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
HERC6Q8IVU3 MTCYBP12-201ENST00000440559 1134 ntBASIC5.97□□□□□ -1.45
HERC6Q8IVU3 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.97□□□□□ -1.45
HERC6Q8IVU3 MTND2P39-201ENST00000457230 764 ntBASIC5.97□□□□□ -1.45
HERC6Q8IVU3 HAUS1P1-201ENST00000505275 832 ntBASIC5.97□□□□□ -1.45
HERC6Q8IVU3 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.97□□□□□ -1.45
HERC6Q8IVU3 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HERC6Q8IVU3 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.97□□□□□ -1.45
HERC6Q8IVU3 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.97□□□□□ -1.45
HERC6Q8IVU3 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC5.97□□□□□ -1.45
HERC6Q8IVU3 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HERC6Q8IVU3 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.97□□□□□ -1.45
HERC6Q8IVU3 AL163952.1-202ENST00000569625 600 ntBASIC5.97□□□□□ -1.45
HERC6Q8IVU3 AC006115.2-201ENST00000596823 202 ntBASIC5.97□□□□□ -1.45
HERC6Q8IVU3 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.97□□□□□ -1.45
HERC6Q8IVU3 AC120053.1-201ENST00000607706 736 ntBASIC5.97□□□□□ -1.45
HERC6Q8IVU3 AC245389.2-201ENST00000616023 576 ntBASIC5.97□□□□□ -1.45
HERC6Q8IVU3 AC242843.1-201ENST00000618702 573 ntBASIC5.97□□□□□ -1.45
HERC6Q8IVU3 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HERC6Q8IVU3 AC015660.5-201ENST00000623238 564 ntBASIC5.97□□□□□ -1.45
HERC6Q8IVU3 AP006248.3-201ENST00000623580 594 ntBASIC5.97□□□□□ -1.45
HERC6Q8IVU3 AL353662.3-201ENST00000625131 237 ntBASIC5.97□□□□□ -1.45
HERC6Q8IVU3 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
HERC6Q8IVU3 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
HERC6Q8IVU3 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HERC6Q8IVU3 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.97□□□□□ -1.45
HERC6Q8IVU3 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
HERC6Q8IVU3 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HERC6Q8IVU3 AC005224.3-201ENST00000584683 2140 ntBASIC5.96□□□□□ -1.45
HERC6Q8IVU3 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
HERC6Q8IVU3 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms