Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 AC006206.1-201ENST00000544842 3387 ntBASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 DDX6P1-205ENST00000441966 1436 ntBASIC5.15□□□□□ -1.58
NUP54Q7Z3B4 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.15□□□□□ -1.58
NUP54Q7Z3B4 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
NUP54Q7Z3B4 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
NUP54Q7Z3B4 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
NUP54Q7Z3B4 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
NUP54Q7Z3B4 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 AL121886.1-201ENST00000358609 435 ntBASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 RNU4-2-201ENST00000365668 141 ntBASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 AC005042.1-201ENST00000393397 800 ntBASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 OR6E1P-201ENST00000414424 923 ntBASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 HSPE1P16-201ENST00000426640 348 ntBASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 AL158073.1-201ENST00000426848 1104 ntBASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 MTND4LP7-201ENST00000431728 294 ntBASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 FMO7P-201ENST00000436045 768 ntBASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 AP000281.1-201ENST00000444036 316 ntBASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 AL353898.1-201ENST00000444055 238 ntBASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 AC023271.1-201ENST00000445936 1090 ntBASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 AL450023.1-201ENST00000450868 751 ntBASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 AP000547.1-201ENST00000454360 617 ntBASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 RN7SL717P-201ENST00000478343 297 ntBASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 AC090543.1-201ENST00000492168 485 ntBASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 SETP12-201ENST00000514068 805 ntBASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 AC016550.3-201ENST00000515706 767 ntBASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 RNU6-889P-201ENST00000517189 103 ntBASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 OR4A17P-201ENST00000526032 904 ntBASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 LINC00557-201ENST00000563184 1279 ntBASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 MRPS21P7-201ENST00000566937 238 ntBASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 AL139124.1-201ENST00000609123 421 ntBASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 AP003497.2-201ENST00000624220 967 ntBASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 AC006453.5-201ENST00000636451 619 ntBASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 AC008691.1-209ENST00000642094 814 ntBASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 ASNSP1-201ENST00000518311 1939 ntBASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NUP54Q7Z3B4 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 AC004817.4-201ENST00000602396 3625 ntBASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 AC011933.2-201ENST00000578539 2790 ntBASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 AC092681.1-201ENST00000297369 291 ntBASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 RNU6-666P-201ENST00000363499 107 ntBASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 RN7SKP6-201ENST00000364795 319 ntBASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 RN7SKP69-201ENST00000365390 305 ntBASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 MIR143-201ENST00000385300 106 ntBASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 UBE2V1P15-201ENST00000407776 448 ntBASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 RNU6-603P-201ENST00000411403 107 ntBASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 OR6C64P-201ENST00000419708 825 ntBASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 RIMKLBP2-201ENST00000424737 654 ntBASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 AL691517.1-201ENST00000440833 1235 ntBASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 AC073909.1-201ENST00000447112 999 ntBASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
NUP54Q7Z3B4 AL358876.1-201ENST00000453364 1075 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 269.9 ms