Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC017007.4-201ENST00000503353 1352 ntBASIC5.38□□□□□ -1.55
PTCHD4Q6ZW05 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.38□□□□□ -1.55
PTCHD4Q6ZW05 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
PTCHD4Q6ZW05 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.38□□□□□ -1.55
PTCHD4Q6ZW05 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.38□□□□□ -1.55
PTCHD4Q6ZW05 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.38□□□□□ -1.55
PTCHD4Q6ZW05 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PTCHD4Q6ZW05 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PTCHD4Q6ZW05 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
PTCHD4Q6ZW05 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.38□□□□□ -1.55
PTCHD4Q6ZW05 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PTCHD4Q6ZW05 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 SPATA2P1-201ENST00000431223 2055 ntBASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 RN7SKP185-201ENST00000362813 326 ntBASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 SNORD116-12-201ENST00000384468 92 ntBASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 VTI1BP4-201ENST00000427516 527 ntBASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 AC096775.1-201ENST00000437724 448 ntBASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 HSFY3P-201ENST00000444242 1191 ntBASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 AC023271.1-201ENST00000445936 1090 ntBASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 SEPT14P24-201ENST00000447236 180 ntBASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 RPL7P45-201ENST00000455851 743 ntBASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 HSPE1P22-201ENST00000456856 327 ntBASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 OR11I1P-201ENST00000486033 954 ntBASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 AC079203.1-201ENST00000487972 404 ntBASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 CDH12P2-201ENST00000504393 298 ntBASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 NACAP5-201ENST00000509863 636 ntBASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 AC108120.2-201ENST00000512973 294 ntBASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 MIR2117-201ENST00000516780 80 ntBASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 AC104417.1-201ENST00000523974 751 ntBASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 MTND4P33-201ENST00000556706 766 ntBASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 RBM22P1-201ENST00000578589 1214 ntBASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 AC008088.1-201ENST00000580993 280 ntBASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 AC018618.2-201ENST00000604770 446 ntBASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 AL080312.2-201ENST00000613001 630 ntBASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 AC012676.3-201ENST00000614983 479 ntBASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 AC096861.1-201ENST00000616652 240 ntBASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 RFPL4AP6-201ENST00000616792 846 ntBASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 AC123767.1-202ENST00000620407 817 ntBASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 AL138693.1-201ENST00000622219 129 ntBASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 AC007603.3-201ENST00000636915 979 ntBASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 AC010325.3-201ENST00000641084 394 ntBASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
PTCHD4Q6ZW05 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AC093671.1-201ENST00000624981 2929 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms