Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 PRUNEP1-201ENST00000425846 705 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 RPL12P17-201ENST00000432393 498 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 GSTM5P1-201ENST00000434751 660 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 MTCO2P20-201ENST00000437339 673 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 RPL5P25-201ENST00000441148 775 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 AC016772.1-201ENST00000444170 1261 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 MTND1P33-201ENST00000446251 917 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 RPL31P15-201ENST00000449770 338 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 MTND2P8-201ENST00000450555 1025 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 AL672138.1-201ENST00000450604 1015 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 AC144530.1-201ENST00000452862 555 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 MTND2P6-201ENST00000455337 1030 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 DUXAP8-207ENST00000456786 622 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 AL122001.1-201ENST00000457027 370 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 RPS27AP2-201ENST00000457576 465 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 AC104164.3-201ENST00000467363 1258 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 RPL23AP73-201ENST00000492507 471 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 AC090638.1-201ENST00000498296 909 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 AC010468.3-201ENST00000508225 458 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 HMGB1P44-201ENST00000508597 572 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 IMPA1P1-201ENST00000510718 842 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 AC005351.1-201ENST00000511152 786 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 RN7SL356P-201ENST00000582228 248 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 AC008521.2-201ENST00000591021 259 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 AC010503.3-201ENST00000594355 540 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 AF230666.2-201ENST00000602328 725 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 AC015982.1-201ENST00000608113 465 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 DUXAP10-204ENST00000612052 616 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 AC127024.6-201ENST00000621598 424 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 LINC00216-201ENST00000623548 1126 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 AP001962.1-201ENST00000624114 559 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 AC103703.1-201ENST00000634783 663 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 AC012321.1-201ENST00000561622 1588 ntBASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ZNF549Q6P9A3 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 MIR133B-201ENST00000362210 119 ntBASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 RNU6-618P-201ENST00000363518 112 ntBASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 RN7SKP15-201ENST00000364742 309 ntBASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 AL133388.1-201ENST00000404509 287 ntBASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 VN1R51P-201ENST00000411675 945 ntBASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 Z93019.1-201ENST00000416450 973 ntBASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 MARK2P12-201ENST00000420129 585 ntBASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 HSPD1P12-201ENST00000429127 1069 ntBASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 AL590399.4-201ENST00000436561 601 ntBASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 AL161636.2-201ENST00000445179 927 ntBASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 AC105399.1-202ENST00000447303 205 ntBASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 AC093166.2-201ENST00000455969 1017 ntBASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 RPL35AP19-201ENST00000469425 329 ntBASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 RN7SL273P-201ENST00000481561 299 ntBASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 MTCO3P27-201ENST00000514397 196 ntBASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 RN7SKP287-201ENST00000516546 266 ntBASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 SCARNA16.4-201ENST00000516956 187 ntBASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 BLZF2P-201ENST00000553776 1130 ntBASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 MTCYBP27-201ENST00000555160 670 ntBASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 AC106730.2-201ENST00000566641 540 ntBASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 AC015720.2-201ENST00000567709 334 ntBASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.32□□□□□ -1.56
ZNF549Q6P9A3 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms