Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 AC009117.1-201ENST00000563948 554 ntBASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 MIR4270-201ENST00000581799 70 ntBASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 MIR4691-201ENST00000583764 85 ntBASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 OR51C1P-201ENST00000608504 942 ntBASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 AC073575.2-201ENST00000614212 627 ntBASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 AC009032.1-201ENST00000617574 431 ntBASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 MIR7641-1-201ENST00000627518 61 ntBASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 IRF5P1-201ENST00000504852 2164 ntBASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 AC132825.1-201ENST00000463573 2247 ntBASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 RPL7P58-201ENST00000402913 758 ntBASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 AL589655.1-201ENST00000405398 482 ntBASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 MIR1182-201ENST00000408363 97 ntBASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 RNU2-22P-201ENST00000411266 212 ntBASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 AL356806.1-201ENST00000422524 916 ntBASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 EI24P4-201ENST00000423683 1078 ntBASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 AL590623.1-201ENST00000427864 105 ntBASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 HSPD1P12-201ENST00000429127 1069 ntBASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 RPS29P10-201ENST00000439197 166 ntBASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 PSAT1P4-201ENST00000466500 526 ntBASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 AP000797.2-201ENST00000475768 606 ntBASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 AC025181.1-201ENST00000477507 416 ntBASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 AC008147.3-201ENST00000548666 354 ntBASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 AC084036.1-201ENST00000609190 508 ntBASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 AC104307.1-201ENST00000616142 196 ntBASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 AC026951.1-201ENST00000559530 2459 ntBASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 AC022417.1-201ENST00000624768 1303 ntBASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 AC007996.1-201ENST00000620414 2821 ntBASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 MAPK10-263ENST00000641052 4307 ntBASIC5.19□□□□□ -1.58
LYSMD4Q5XG99 AL121839.2-201ENST00000565058 6943 ntBASIC5.18□□□□□ -1.58
LYSMD4Q5XG99 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LYSMD4Q5XG99 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LYSMD4Q5XG99 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LYSMD4Q5XG99 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LYSMD4Q5XG99 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
LYSMD4Q5XG99 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.18□□□□□ -1.58
LYSMD4Q5XG99 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LYSMD4Q5XG99 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LYSMD4Q5XG99 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LYSMD4Q5XG99 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.18□□□□□ -1.58
LYSMD4Q5XG99 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.18□□□□□ -1.58
LYSMD4Q5XG99 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms