Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 TCEA1P3-201ENST00000443005 880 ntBASIC5.28□□□□□ -1.56
PTPN20Q4JDL3 OR7E125P-201ENST00000443450 846 ntBASIC5.28□□□□□ -1.56
PTPN20Q4JDL3 MRPL35P2-201ENST00000448009 511 ntBASIC5.28□□□□□ -1.56
PTPN20Q4JDL3 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.28□□□□□ -1.56
PTPN20Q4JDL3 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.28□□□□□ -1.56
PTPN20Q4JDL3 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.28□□□□□ -1.56
PTPN20Q4JDL3 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.28□□□□□ -1.56
PTPN20Q4JDL3 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.28□□□□□ -1.56
PTPN20Q4JDL3 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.28□□□□□ -1.56
PTPN20Q4JDL3 AGGF1P9-201ENST00000561884 913 ntBASIC5.28□□□□□ -1.56
PTPN20Q4JDL3 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.28□□□□□ -1.56
PTPN20Q4JDL3 EIF1P5-201ENST00000585002 234 ntBASIC5.28□□□□□ -1.56
PTPN20Q4JDL3 AC093799.2-201ENST00000610062 578 ntBASIC5.28□□□□□ -1.56
PTPN20Q4JDL3 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.28□□□□□ -1.56
PTPN20Q4JDL3 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
PTPN20Q4JDL3 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PTPN20Q4JDL3 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.28□□□□□ -1.56
PTPN20Q4JDL3 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTPN20Q4JDL3 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PTPN20Q4JDL3 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PTPN20Q4JDL3 AC104623.2-202ENST00000623477 4002 ntBASIC5.28□□□□□ -1.56
PTPN20Q4JDL3 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTPN20Q4JDL3 MTCO1P7-201ENST00000419523 1542 ntBASIC5.28□□□□□ -1.56
PTPN20Q4JDL3 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PTPN20Q4JDL3 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PTPN20Q4JDL3 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTPN20Q4JDL3 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTPN20Q4JDL3 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PTPN20Q4JDL3 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PTPN20Q4JDL3 RNA5SP428-201ENST00000365129 132 ntBASIC5.27□□□□□ -1.57
PTPN20Q4JDL3 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PTPN20Q4JDL3 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.27□□□□□ -1.57
PTPN20Q4JDL3 BMS1P13-201ENST00000417301 885 ntBASIC5.27□□□□□ -1.57
PTPN20Q4JDL3 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.27□□□□□ -1.57
PTPN20Q4JDL3 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.27□□□□□ -1.57
PTPN20Q4JDL3 RPL35AP21-201ENST00000437667 333 ntBASIC5.27□□□□□ -1.57
PTPN20Q4JDL3 SCARNA21.2-201ENST00000516600 166 ntBASIC5.27□□□□□ -1.57
PTPN20Q4JDL3 AC105031.1-201ENST00000518550 476 ntBASIC5.27□□□□□ -1.57
PTPN20Q4JDL3 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.27□□□□□ -1.57
PTPN20Q4JDL3 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTPN20Q4JDL3 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.27□□□□□ -1.57
PTPN20Q4JDL3 NMNAT1P1-201ENST00000554095 876 ntBASIC5.27□□□□□ -1.57
PTPN20Q4JDL3 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.27□□□□□ -1.57
PTPN20Q4JDL3 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.27□□□□□ -1.57
PTPN20Q4JDL3 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.27□□□□□ -1.57
PTPN20Q4JDL3 AC011840.5-201ENST00000582125 771 ntBASIC5.27□□□□□ -1.57
PTPN20Q4JDL3 MEMO1P5-201ENST00000604810 406 ntBASIC5.27□□□□□ -1.57
PTPN20Q4JDL3 AC005377.1-201ENST00000605126 456 ntBASIC5.27□□□□□ -1.57
PTPN20Q4JDL3 AL121612.2-201ENST00000612261 482 ntBASIC5.27□□□□□ -1.57
PTPN20Q4JDL3 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.27□□□□□ -1.57
PTPN20Q4JDL3 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
PTPN20Q4JDL3 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.27□□□□□ -1.57
PTPN20Q4JDL3 AC068446.1-201ENST00000556425 1549 ntBASIC5.27□□□□□ -1.57
PTPN20Q4JDL3 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.27□□□□□ -1.57
PTPN20Q4JDL3 SCARNA15-201ENST00000607520 4325 ntBASIC5.27□□□□□ -1.57
PTPN20Q4JDL3 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 AC007738.1-201ENST00000413892 348 ntBASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 AC013429.2-201ENST00000418798 781 ntBASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 AL356981.1-201ENST00000454879 684 ntBASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 AC018638.3-201ENST00000461273 132 ntBASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 AC110749.1-201ENST00000462007 357 ntBASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 RPS4XP14-201ENST00000493072 781 ntBASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 AC073073.1-201ENST00000493920 463 ntBASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 AC013701.1-201ENST00000522657 465 ntBASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 OR10G5P-201ENST00000532733 358 ntBASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 OR7E18P-201ENST00000592589 702 ntBASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 SAMMSON-227ENST00000642114 1199 ntBASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTPN20Q4JDL3 DDX18P6-201ENST00000450119 1997 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms