Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
GABPAQ06546 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
GABPAQ06546 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
GABPAQ06546 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.91□□□□□ -1.46
GABPAQ06546 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
GABPAQ06546 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
GABPAQ06546 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.46
GABPAQ06546 AC012618.3-205ENST00000637896 1496 ntBASIC5.9□□□□□ -1.46
GABPAQ06546 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
GABPAQ06546 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.9□□□□□ -1.46
GABPAQ06546 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
GABPAQ06546 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.9□□□□□ -1.46
GABPAQ06546 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
GABPAQ06546 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.9□□□□□ -1.46
GABPAQ06546 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
GABPAQ06546 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
GABPAQ06546 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
GABPAQ06546 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.9□□□□□ -1.46
GABPAQ06546 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
GABPAQ06546 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
GABPAQ06546 AL136116.2-201ENST00000404020 785 ntBASIC5.9□□□□□ -1.46
GABPAQ06546 RN7SKP216-201ENST00000411050 312 ntBASIC5.9□□□□□ -1.46
GABPAQ06546 GTF2IP5-201ENST00000414608 731 ntBASIC5.9□□□□□ -1.46
GABPAQ06546 OR6C71P-201ENST00000432580 913 ntBASIC5.9□□□□□ -1.46
GABPAQ06546 AC013410.1-201ENST00000436223 1232 ntBASIC5.9□□□□□ -1.46
GABPAQ06546 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.9□□□□□ -1.46
GABPAQ06546 H2AFZP6-201ENST00000444403 394 ntBASIC5.9□□□□□ -1.46
GABPAQ06546 AC063943.1-201ENST00000465434 453 ntBASIC5.9□□□□□ -1.46
GABPAQ06546 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.9□□□□□ -1.46
GABPAQ06546 AC098976.1-201ENST00000513014 541 ntBASIC5.9□□□□□ -1.46
GABPAQ06546 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.9□□□□□ -1.46
GABPAQ06546 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.9□□□□□ -1.46
GABPAQ06546 AP001542.1-201ENST00000591314 200 ntBASIC5.9□□□□□ -1.46
GABPAQ06546 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.9□□□□□ -1.46
GABPAQ06546 AC104785.1-201ENST00000603220 588 ntBASIC5.9□□□□□ -1.46
GABPAQ06546 MIR7703-201ENST00000620784 77 ntBASIC5.9□□□□□ -1.46
GABPAQ06546 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.9□□□□□ -1.46
GABPAQ06546 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.9□□□□□ -1.46
GABPAQ06546 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
GABPAQ06546 OR4G1P-202ENST00000641173 1788 ntBASIC5.9□□□□□ -1.47
GABPAQ06546 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
GABPAQ06546 SMG1P7-201ENST00000565246 2704 ntBASIC5.9□□□□□ -1.47
GABPAQ06546 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
GABPAQ06546 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
GABPAQ06546 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
GABPAQ06546 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
GABPAQ06546 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
GABPAQ06546 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
GABPAQ06546 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.89□□□□□ -1.47
GABPAQ06546 AL031595.2-201ENST00000624215 19071 ntBASIC5.89□□□□□ -1.47
GABPAQ06546 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
GABPAQ06546 RPL10P10-201ENST00000403509 664 ntBASIC5.89□□□□□ -1.47
GABPAQ06546 SNORA81-201ENST00000408493 178 ntBASIC5.89□□□□□ -1.47
GABPAQ06546 RNA5SP113-201ENST00000410486 84 ntBASIC5.89□□□□□ -1.47
GABPAQ06546 Y_RNA.625-201ENST00000411256 107 ntBASIC5.89□□□□□ -1.47
GABPAQ06546 RPL12P9-201ENST00000412942 488 ntBASIC5.89□□□□□ -1.47
GABPAQ06546 AC004074.1-201ENST00000421810 1063 ntBASIC5.89□□□□□ -1.47
GABPAQ06546 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.89□□□□□ -1.47
GABPAQ06546 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.89□□□□□ -1.47
GABPAQ06546 RPS27AP6-201ENST00000427962 448 ntBASIC5.89□□□□□ -1.47
GABPAQ06546 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.89□□□□□ -1.47
GABPAQ06546 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.89□□□□□ -1.47
GABPAQ06546 RBMY2TP-201ENST00000451162 947 ntBASIC5.89□□□□□ -1.47
GABPAQ06546 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.89□□□□□ -1.47
GABPAQ06546 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.89□□□□□ -1.47
GABPAQ06546 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.89□□□□□ -1.47
GABPAQ06546 UBE2FP2-201ENST00000566646 462 ntBASIC5.89□□□□□ -1.47
GABPAQ06546 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.89□□□□□ -1.47
GABPAQ06546 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.89□□□□□ -1.47
GABPAQ06546 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.89□□□□□ -1.47
GABPAQ06546 AC020910.3-201ENST00000603701 874 ntBASIC5.89□□□□□ -1.47
GABPAQ06546 AL391358.1-201ENST00000605342 190 ntBASIC5.89□□□□□ -1.47
GABPAQ06546 MIR6820-201ENST00000611508 62 ntBASIC5.89□□□□□ -1.47
GABPAQ06546 AL031658.2-201ENST00000616850 651 ntBASIC5.89□□□□□ -1.47
GABPAQ06546 AC009120.7-201ENST00000623452 780 ntBASIC5.89□□□□□ -1.47
GABPAQ06546 AC087821.1-201ENST00000623639 567 ntBASIC5.89□□□□□ -1.47
GABPAQ06546 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.89□□□□□ -1.47
GABPAQ06546 HSPA8P14-201ENST00000552265 1805 ntBASIC5.89□□□□□ -1.47
GABPAQ06546 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
GABPAQ06546 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
GABPAQ06546 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
GABPAQ06546 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
GABPAQ06546 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
GABPAQ06546 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.89□□□□□ -1.47
GABPAQ06546 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
GABPAQ06546 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
GABPAQ06546 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
GABPAQ06546 AC139426.3-201ENST00000605648 2059 ntBASIC5.88□□□□□ -1.47
GABPAQ06546 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
GABPAQ06546 RN7SKP115-201ENST00000363177 317 ntBASIC5.88□□□□□ -1.47
GABPAQ06546 AL021331.1-201ENST00000402817 582 ntBASIC5.88□□□□□ -1.47
GABPAQ06546 AL035079.1-201ENST00000405210 287 ntBASIC5.88□□□□□ -1.47
GABPAQ06546 AL590139.1-201ENST00000416267 400 ntBASIC5.88□□□□□ -1.47
GABPAQ06546 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.88□□□□□ -1.47
GABPAQ06546 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.88□□□□□ -1.47
GABPAQ06546 TXNP5-201ENST00000441043 315 ntBASIC5.88□□□□□ -1.47
GABPAQ06546 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.88□□□□□ -1.47
GABPAQ06546 AC009963.4-201ENST00000448535 339 ntBASIC5.88□□□□□ -1.47
GABPAQ06546 AL513533.1-201ENST00000453728 415 ntBASIC5.88□□□□□ -1.47
GABPAQ06546 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms