Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC2.96□□□□□ -1.94
HSPG2P98160 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.96□□□□□ -1.94
HSPG2P98160 SSR3-206ENST00000476217 807 ntTSL 3 BASIC2.96□□□□□ -1.94
HSPG2P98160 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC2.96□□□□□ -1.94
HSPG2P98160 AC107016.1-201ENST00000550463 337 ntBASIC2.96□□□□□ -1.94
HSPG2P98160 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
HSPG2P98160 AGGF1P6-201ENST00000569213 976 ntBASIC2.96□□□□□ -1.94
HSPG2P98160 AL133338.2-201ENST00000604292 736 ntBASIC2.96□□□□□ -1.94
HSPG2P98160 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.96□□□□□ -1.94
HSPG2P98160 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
HSPG2P98160 ZNF592-201ENST00000299927 7863 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
HSPG2P98160 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
HSPG2P98160 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HSPG2P98160 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC2.96□□□□□ -1.94
HSPG2P98160 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HSPG2P98160 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
HSPG2P98160 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HSPG2P98160 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HSPG2P98160 ERVFRD-3-201ENST00000578561 1617 ntBASIC2.96□□□□□ -1.94
HSPG2P98160 ST7-212ENST00000422922 1887 ntTSL 5 BASIC2.96□□□□□ -1.94
HSPG2P98160 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
HSPG2P98160 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HSPG2P98160 RNU1-94P-201ENST00000362627 173 ntBASIC2.96□□□□□ -1.94
HSPG2P98160 RNA5SP130-201ENST00000364431 114 ntBASIC2.96□□□□□ -1.94
HSPG2P98160 RPS26P8-201ENST00000393490 348 ntBASIC2.96□□□□□ -1.94
HSPG2P98160 RPL11P3-201ENST00000395256 523 ntBASIC2.96□□□□□ -1.94
HSPG2P98160 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC2.96□□□□□ -1.94
HSPG2P98160 U3.32-201ENST00000408116 212 ntBASIC2.96□□□□□ -1.94
HSPG2P98160 RPL37P1-201ENST00000432310 284 ntBASIC2.96□□□□□ -1.94
HSPG2P98160 TCEA1P3-201ENST00000443005 880 ntBASIC2.96□□□□□ -1.94
HSPG2P98160 RPL7P15-201ENST00000461190 712 ntBASIC2.96□□□□□ -1.94
HSPG2P98160 ABCC13-202ENST00000463099 3842 ntBASIC2.96□□□□□ -1.94
HSPG2P98160 F11-205ENST00000492972 1204 ntTSL 2 BASIC2.96□□□□□ -1.94
HSPG2P98160 UBA2-208ENST00000592791 910 ntTSL 2 BASIC2.96□□□□□ -1.94
HSPG2P98160 AL133243.1-201ENST00000614487 366 ntBASIC2.96□□□□□ -1.94
HSPG2P98160 BX005214.3-202ENST00000619809 325 ntBASIC2.96□□□□□ -1.94
HSPG2P98160 AC097478.1-206ENST00000513572 2010 ntTSL 3 BASIC2.96□□□□□ -1.94
HSPG2P98160 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC2.96□□□□□ -1.94
HSPG2P98160 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HSPG2P98160 AC106871.1-201ENST00000568324 3102 ntBASIC2.96□□□□□ -1.94
HSPG2P98160 FTX-215ENST00000638681 9771 ntTSL 5 BASIC2.96□□□□□ -1.94
HSPG2P98160 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HSPG2P98160 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HSPG2P98160 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC2.96□□□□□ -1.94
HSPG2P98160 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC2.96□□□□□ -1.94
HSPG2P98160 RNA5SP283-201ENST00000365604 119 ntBASIC2.96□□□□□ -1.94
HSPG2P98160 RNU1-82P-201ENST00000390851 165 ntBASIC2.96□□□□□ -1.94
HSPG2P98160 PTMAP5-201ENST00000393073 333 ntBASIC2.96□□□□□ -1.94
HSPG2P98160 RN7SKP16-201ENST00000410180 299 ntBASIC2.96□□□□□ -1.94
HSPG2P98160 RN7SKP33-201ENST00000410942 340 ntBASIC2.96□□□□□ -1.94
HSPG2P98160 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC2.96□□□□□ -1.94
HSPG2P98160 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC2.96□□□□□ -1.94
HSPG2P98160 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HSPG2P98160 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC2.96□□□□□ -1.94
HSPG2P98160 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC2.96□□□□□ -1.94
HSPG2P98160 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HSPG2P98160 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC2.96□□□□□ -1.94
HSPG2P98160 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HSPG2P98160 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC2.96□□□□□ -1.94
HSPG2P98160 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HSPG2P98160 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HSPG2P98160 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
HSPG2P98160 APBB2-201ENST00000295974 8972 ntAPPRIS ALT1 TSL 2 BASIC2.95□□□□□ -1.94
HSPG2P98160 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
HSPG2P98160 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
HSPG2P98160 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC2.95□□□□□ -1.94
HSPG2P98160 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HSPG2P98160 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC2.95□□□□□ -1.94
HSPG2P98160 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC2.95□□□□□ -1.94
HSPG2P98160 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
HSPG2P98160 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC2.95□□□□□ -1.94
HSPG2P98160 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
HSPG2P98160 FAT3-206ENST00000533797 7894 ntTSL 2 BASIC2.95□□□□□ -1.94
HSPG2P98160 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.95□□□□□ -1.94
HSPG2P98160 RN7SL558P-201ENST00000497468 299 ntBASIC2.95□□□□□ -1.94
HSPG2P98160 AC022360.1-201ENST00000521058 340 ntBASIC2.95□□□□□ -1.94
HSPG2P98160 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC2.95□□□□□ -1.94
HSPG2P98160 AC093014.1-201ENST00000548926 724 ntBASIC2.95□□□□□ -1.94
HSPG2P98160 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC2.95□□□□□ -1.94
HSPG2P98160 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HSPG2P98160 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
HSPG2P98160 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HSPG2P98160 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
HSPG2P98160 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HSPG2P98160 MIR491-201ENST00000384877 84 ntBASIC2.95□□□□□ -1.94
HSPG2P98160 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC2.95□□□□□ -1.94
HSPG2P98160 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC2.95□□□□□ -1.94
HSPG2P98160 AL450023.3-201ENST00000440592 271 ntBASIC2.95□□□□□ -1.94
HSPG2P98160 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC2.95□□□□□ -1.94
HSPG2P98160 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HSPG2P98160 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC2.95□□□□□ -1.94
HSPG2P98160 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC2.95□□□□□ -1.94
HSPG2P98160 AC011471.1-201ENST00000585766 187 ntBASIC2.95□□□□□ -1.94
HSPG2P98160 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC2.95□□□□□ -1.94
HSPG2P98160 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HSPG2P98160 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
HSPG2P98160 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
HSPG2P98160 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC2.95□□□□□ -1.94
HSPG2P98160 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HSPG2P98160 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms