Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.23□□□□□ -1.57
CBX1P83916 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.23□□□□□ -1.57
CBX1P83916 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CBX1P83916 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.23□□□□□ -1.57
CBX1P83916 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CBX1P83916 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CBX1P83916 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CBX1P83916 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.22□□□□□ -1.57
CBX1P83916 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
CBX1P83916 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.22□□□□□ -1.57
CBX1P83916 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CBX1P83916 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.22□□□□□ -1.57
CBX1P83916 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CBX1P83916 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.22□□□□□ -1.57
CBX1P83916 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CBX1P83916 AL096711.1-201ENST00000404780 554 ntBASIC5.22□□□□□ -1.57
CBX1P83916 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.22□□□□□ -1.57
CBX1P83916 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.22□□□□□ -1.57
CBX1P83916 RGS17P1-201ENST00000423358 553 ntBASIC5.22□□□□□ -1.57
CBX1P83916 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.22□□□□□ -1.57
CBX1P83916 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.22□□□□□ -1.57
CBX1P83916 CEACAMP11-201ENST00000455211 583 ntBASIC5.22□□□□□ -1.57
CBX1P83916 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.22□□□□□ -1.57
CBX1P83916 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.22□□□□□ -1.57
CBX1P83916 AC108103.1-201ENST00000511286 446 ntBASIC5.22□□□□□ -1.57
CBX1P83916 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.22□□□□□ -1.57
CBX1P83916 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.22□□□□□ -1.57
CBX1P83916 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CBX1P83916 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.22□□□□□ -1.57
CBX1P83916 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.22□□□□□ -1.57
CBX1P83916 AC007346.1-201ENST00000569208 867 ntBASIC5.22□□□□□ -1.57
CBX1P83916 AL121834.1-201ENST00000572284 509 ntBASIC5.22□□□□□ -1.57
CBX1P83916 AP005432.2-201ENST00000608162 586 ntBASIC5.22□□□□□ -1.57
CBX1P83916 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CBX1P83916 AC131238.1-201ENST00000617135 328 ntBASIC5.22□□□□□ -1.57
CBX1P83916 RMST_9.1-201ENST00000619945 193 ntBASIC5.22□□□□□ -1.57
CBX1P83916 AC211486.4-201ENST00000621495 113 ntBASIC5.22□□□□□ -1.57
CBX1P83916 AC015804.1-201ENST00000622935 435 ntBASIC5.22□□□□□ -1.57
CBX1P83916 AC025262.3-201ENST00000623666 360 ntBASIC5.22□□□□□ -1.57
CBX1P83916 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.22□□□□□ -1.57
CBX1P83916 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.22□□□□□ -1.57
CBX1P83916 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CBX1P83916 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CBX1P83916 IQCB2P-201ENST00000401788 1633 ntBASIC5.22□□□□□ -1.57
CBX1P83916 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.22□□□□□ -1.57
CBX1P83916 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CBX1P83916 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.22□□□□□ -1.57
CBX1P83916 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC5.22□□□□□ -1.57
CBX1P83916 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.22□□□□□ -1.57
CBX1P83916 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CBX1P83916 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
CBX1P83916 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
CBX1P83916 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC5.21□□□□□ -1.58
CBX1P83916 AC008627.1-201ENST00000517511 1704 ntBASIC5.21□□□□□ -1.58
CBX1P83916 RHOT1P2-201ENST00000366423 333 ntBASIC5.21□□□□□ -1.58
CBX1P83916 GCNT6-201ENST00000379591 934 ntBASIC5.21□□□□□ -1.58
CBX1P83916 MIR513A2-201ENST00000385249 127 ntBASIC5.21□□□□□ -1.58
CBX1P83916 RNA5SP39-201ENST00000411245 120 ntBASIC5.21□□□□□ -1.58
CBX1P83916 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.21□□□□□ -1.58
CBX1P83916 RAB9AP4-201ENST00000415230 609 ntBASIC5.21□□□□□ -1.58
CBX1P83916 QRSL1P2-201ENST00000418582 964 ntBASIC5.21□□□□□ -1.58
CBX1P83916 SLC35E1P1-201ENST00000419313 864 ntBASIC5.21□□□□□ -1.58
CBX1P83916 SETP10-201ENST00000424368 814 ntBASIC5.21□□□□□ -1.58
CBX1P83916 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.21□□□□□ -1.58
CBX1P83916 COX6CP13-201ENST00000428703 226 ntBASIC5.21□□□□□ -1.58
CBX1P83916 AL353662.1-201ENST00000439099 327 ntBASIC5.21□□□□□ -1.58
CBX1P83916 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.21□□□□□ -1.58
CBX1P83916 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.21□□□□□ -1.58
CBX1P83916 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.21□□□□□ -1.58
CBX1P83916 GEMIN2P1-201ENST00000454246 752 ntBASIC5.21□□□□□ -1.58
CBX1P83916 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.21□□□□□ -1.58
CBX1P83916 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.21□□□□□ -1.58
CBX1P83916 MTCYBP14-201ENST00000457471 715 ntBASIC5.21□□□□□ -1.58
CBX1P83916 AC091180.1-201ENST00000462104 372 ntBASIC5.21□□□□□ -1.58
CBX1P83916 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.21□□□□□ -1.58
CBX1P83916 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.21□□□□□ -1.58
CBX1P83916 RPL29P23-201ENST00000486188 442 ntBASIC5.21□□□□□ -1.58
CBX1P83916 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.21□□□□□ -1.58
CBX1P83916 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.21□□□□□ -1.58
CBX1P83916 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.21□□□□□ -1.58
CBX1P83916 CYCSP28-201ENST00000534284 321 ntBASIC5.21□□□□□ -1.58
CBX1P83916 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.21□□□□□ -1.58
CBX1P83916 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.21□□□□□ -1.58
CBX1P83916 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.21□□□□□ -1.58
CBX1P83916 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.21□□□□□ -1.58
CBX1P83916 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.21□□□□□ -1.58
CBX1P83916 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.21□□□□□ -1.58
CBX1P83916 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.21□□□□□ -1.58
CBX1P83916 RN7SL230P-201ENST00000580835 303 ntBASIC5.21□□□□□ -1.58
CBX1P83916 AP005119.1-201ENST00000580956 292 ntBASIC5.21□□□□□ -1.58
CBX1P83916 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.21□□□□□ -1.58
CBX1P83916 AC011891.2-201ENST00000604949 397 ntBASIC5.21□□□□□ -1.58
CBX1P83916 COX6CP4-201ENST00000605798 228 ntBASIC5.21□□□□□ -1.58
CBX1P83916 AC005828.7-201ENST00000607331 556 ntBASIC5.21□□□□□ -1.58
CBX1P83916 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CBX1P83916 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CBX1P83916 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CBX1P83916 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CBX1P83916 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CBX1P83916 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms