Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.51□□□□□ -1.53
CLRN1P58418 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLRN1P58418 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLRN1P58418 LINC01613-201ENST00000561476 2780 ntBASIC5.51□□□□□ -1.53
CLRN1P58418 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLRN1P58418 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLRN1P58418 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CLRN1P58418 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLRN1P58418 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CLRN1P58418 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.5□□□□□ -1.53
CLRN1P58418 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLRN1P58418 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLRN1P58418 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CLRN1P58418 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLRN1P58418 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CLRN1P58418 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.5□□□□□ -1.53
CLRN1P58418 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.5□□□□□ -1.53
CLRN1P58418 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.5□□□□□ -1.53
CLRN1P58418 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.5□□□□□ -1.53
CLRN1P58418 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLRN1P58418 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.5□□□□□ -1.53
CLRN1P58418 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLRN1P58418 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLRN1P58418 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CLRN1P58418 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLRN1P58418 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.5□□□□□ -1.53
CLRN1P58418 RNU6-532P-201ENST00000384318 107 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 MIR191-201ENST00000384873 92 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 RNU6-192P-201ENST00000391253 100 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 AC093719.1-202ENST00000392735 373 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 AL157702.1-201ENST00000398764 426 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLRN1P58418 AC017078.1-201ENST00000416146 368 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 RPS7P8-201ENST00000418311 581 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.5□□□□□ -1.53
CLRN1P58418 Z82198.3-201ENST00000421145 199 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.5□□□□□ -1.53
CLRN1P58418 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.5□□□□□ -1.53
CLRN1P58418 AC016027.5-201ENST00000427227 210 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.5□□□□□ -1.53
CLRN1P58418 AC094019.1-201ENST00000434678 472 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 FTH1P16-201ENST00000435241 552 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.5□□□□□ -1.53
CLRN1P58418 OR3D1P-201ENST00000438288 955 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC5.5□□□□□ -1.53
CLRN1P58418 NPM1P33-201ENST00000438918 872 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 MTND3P1-201ENST00000441336 220 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 RPL23AP76-201ENST00000441860 458 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 ARL5AP2-201ENST00000444698 533 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.5□□□□□ -1.53
CLRN1P58418 HIGD1AP16-201ENST00000450986 258 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.5□□□□□ -1.53
CLRN1P58418 AC019084.1-201ENST00000457337 432 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 AC110749.1-201ENST00000462007 357 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.5□□□□□ -1.53
CLRN1P58418 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.5□□□□□ -1.53
CLRN1P58418 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLRN1P58418 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.5□□□□□ -1.53
CLRN1P58418 SNX18P24-201ENST00000505249 671 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.5□□□□□ -1.53
CLRN1P58418 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.5□□□□□ -1.53
CLRN1P58418 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CLRN1P58418 MTATP6P1-201ENST00000514057 681 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 AC023632.1-201ENST00000518463 375 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.5□□□□□ -1.53
CLRN1P58418 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.5□□□□□ -1.53
CLRN1P58418 NPIPB14P-203ENST00000532298 987 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 AP001858.2-201ENST00000536213 601 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.5□□□□□ -1.53
CLRN1P58418 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLRN1P58418 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
CLRN1P58418 AC020916.2-201ENST00000591242 360 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 VN1R90P-201ENST00000595717 726 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.5□□□□□ -1.53
CLRN1P58418 DEFB131E-202ENST00000602581 683 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 AL583832.1-201ENST00000603227 784 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.5□□□□□ -1.53
CLRN1P58418 AC022509.4-201ENST00000621404 572 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC5.5□□□□□ -1.53
CLRN1P58418 AF246928.1-201ENST00000623768 87 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 AC007494.3-201ENST00000624660 743 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 AC087821.2-201ENST00000637086 450 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
CLRN1P58418 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
CLRN1P58418 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLRN1P58418 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
CLRN1P58418 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CLRN1P58418 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CLRN1P58418 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.5□□□□□ -1.53
CLRN1P58418 OFD1P17-201ENST00000437639 3018 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLRN1P58418 AP005901.5-201ENST00000545779 1796 ntBASIC5.5□□□□□ -1.53
CLRN1P58418 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLRN1P58418 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.49□□□□□ -1.53
CLRN1P58418 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLRN1P58418 AL133243.2-201ENST00000610331 1621 ntBASIC5.49□□□□□ -1.53
CLRN1P58418 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.49□□□□□ -1.53
CLRN1P58418 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLRN1P58418 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLRN1P58418 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms