Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC008147.3-201ENST00000548666 354 ntBASIC4.99□□□□□ -1.61
CLDN6P56747 EDDM3DP-201ENST00000554692 434 ntBASIC4.99□□□□□ -1.61
CLDN6P56747 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.99□□□□□ -1.61
CLDN6P56747 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.99□□□□□ -1.61
CLDN6P56747 RN7SL356P-201ENST00000582228 248 ntBASIC4.99□□□□□ -1.61
CLDN6P56747 AC073575.2-201ENST00000614212 627 ntBASIC4.99□□□□□ -1.61
CLDN6P56747 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CLDN6P56747 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.99□□□□□ -1.61
CLDN6P56747 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.99□□□□□ -1.61
CLDN6P56747 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.99□□□□□ -1.61
CLDN6P56747 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.99□□□□□ -1.61
CLDN6P56747 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.99□□□□□ -1.61
CLDN6P56747 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.99□□□□□ -1.61
CLDN6P56747 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN6P56747 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
CLDN6P56747 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.99□□□□□ -1.61
CLDN6P56747 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN6P56747 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.98□□□□□ -1.61
CLDN6P56747 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.98□□□□□ -1.61
CLDN6P56747 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN6P56747 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN6P56747 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.98□□□□□ -1.61
CLDN6P56747 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN6P56747 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CLDN6P56747 AC007996.1-201ENST00000620414 2821 ntBASIC4.98□□□□□ -1.61
CLDN6P56747 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN6P56747 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC4.98□□□□□ -1.61
CLDN6P56747 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN6P56747 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.98□□□□□ -1.61
CLDN6P56747 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.98□□□□□ -1.61
CLDN6P56747 SNORD56.6-201ENST00000384569 71 ntBASIC4.98□□□□□ -1.61
CLDN6P56747 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CLDN6P56747 MIR1182-201ENST00000408363 97 ntBASIC4.98□□□□□ -1.61
CLDN6P56747 RPS27AP6-201ENST00000427962 448 ntBASIC4.98□□□□□ -1.61
CLDN6P56747 VDAC1P6-201ENST00000430062 855 ntBASIC4.98□□□□□ -1.61
CLDN6P56747 MTND2P40-201ENST00000436718 841 ntBASIC4.98□□□□□ -1.61
CLDN6P56747 RPL5P25-201ENST00000441148 775 ntBASIC4.98□□□□□ -1.61
CLDN6P56747 AC023271.1-201ENST00000445936 1090 ntBASIC4.98□□□□□ -1.61
CLDN6P56747 STRADBP1-201ENST00000478954 1281 ntBASIC4.98□□□□□ -1.61
CLDN6P56747 RPS17P5-201ENST00000498293 408 ntBASIC4.98□□□□□ -1.61
CLDN6P56747 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.98□□□□□ -1.61
CLDN6P56747 MRPS33P2-201ENST00000507850 322 ntBASIC4.98□□□□□ -1.61
CLDN6P56747 RN7SKP5-201ENST00000517045 272 ntBASIC4.98□□□□□ -1.61
CLDN6P56747 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.98□□□□□ -1.61
CLDN6P56747 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.98□□□□□ -1.61
CLDN6P56747 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.98□□□□□ -1.61
CLDN6P56747 UBE2FP2-201ENST00000566646 462 ntBASIC4.98□□□□□ -1.61
CLDN6P56747 MIR4737-201ENST00000583979 81 ntBASIC4.98□□□□□ -1.61
CLDN6P56747 AC009027.1-201ENST00000604510 479 ntBASIC4.98□□□□□ -1.61
CLDN6P56747 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.98□□□□□ -1.61
CLDN6P56747 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.98□□□□□ -1.61
CLDN6P56747 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.98□□□□□ -1.61
CLDN6P56747 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN6P56747 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CLDN6P56747 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CLDN6P56747 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN6P56747 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN6P56747 ALB-220ENST00000621628 1606 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN6P56747 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CLDN6P56747 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
CLDN6P56747 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN6P56747 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CLDN6P56747 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN6P56747 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN6P56747 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.97□□□□□ -1.61
CLDN6P56747 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN6P56747 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.97□□□□□ -1.61
CLDN6P56747 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CLDN6P56747 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CLDN6P56747 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CLDN6P56747 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.97□□□□□ -1.61
CLDN6P56747 RNA5SP332-201ENST00000391063 115 ntBASIC4.97□□□□□ -1.61
CLDN6P56747 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CLDN6P56747 AL445213.1-201ENST00000412589 747 ntBASIC4.97□□□□□ -1.61
CLDN6P56747 AC119751.6-201ENST00000416712 186 ntBASIC4.97□□□□□ -1.61
CLDN6P56747 REREP1Y-201ENST00000422655 198 ntBASIC4.97□□□□□ -1.61
CLDN6P56747 RIMKLBP2-201ENST00000424737 654 ntBASIC4.97□□□□□ -1.61
CLDN6P56747 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.97□□□□□ -1.61
CLDN6P56747 NPM1P48-201ENST00000436002 853 ntBASIC4.97□□□□□ -1.61
CLDN6P56747 REREP2Y-201ENST00000439103 200 ntBASIC4.97□□□□□ -1.61
CLDN6P56747 SNORD125-201ENST00000459538 96 ntBASIC4.97□□□□□ -1.61
CLDN6P56747 AC090602.1-201ENST00000469695 252 ntBASIC4.97□□□□□ -1.61
CLDN6P56747 AC026979.1-201ENST00000492525 396 ntBASIC4.97□□□□□ -1.61
CLDN6P56747 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.97□□□□□ -1.61
CLDN6P56747 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.97□□□□□ -1.61
CLDN6P56747 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN6P56747 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.97□□□□□ -1.61
CLDN6P56747 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.97□□□□□ -1.61
CLDN6P56747 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN6P56747 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN6P56747 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN6P56747 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CLDN6P56747 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN6P56747 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN6P56747 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN6P56747 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN6P56747 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN6P56747 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN6P56747 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.97□□□□□ -1.61
CLDN6P56747 AL138820.1-201ENST00000617901 5305 ntBASIC4.96□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms