Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.26□□□□□ -1.57
CDH4P55283 AL390316.1-201ENST00000406279 553 ntBASIC5.26□□□□□ -1.57
CDH4P55283 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.26□□□□□ -1.57
CDH4P55283 AC093162.1-201ENST00000419682 124 ntBASIC5.26□□□□□ -1.57
CDH4P55283 BRWD1P3-201ENST00000428816 390 ntBASIC5.26□□□□□ -1.57
CDH4P55283 NDUFA5P8-201ENST00000449019 346 ntBASIC5.26□□□□□ -1.57
CDH4P55283 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.26□□□□□ -1.57
CDH4P55283 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.26□□□□□ -1.57
CDH4P55283 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.26□□□□□ -1.57
CDH4P55283 AC004453.1-201ENST00000487895 408 ntBASIC5.26□□□□□ -1.57
CDH4P55283 AC004980.4-201ENST00000513375 203 ntBASIC5.26□□□□□ -1.57
CDH4P55283 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH4P55283 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.26□□□□□ -1.57
CDH4P55283 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH4P55283 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CDH4P55283 AC009852.2-201ENST00000567898 485 ntBASIC5.26□□□□□ -1.57
CDH4P55283 AC022884.2-201ENST00000578535 580 ntBASIC5.26□□□□□ -1.57
CDH4P55283 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.26□□□□□ -1.57
CDH4P55283 VN1R81P-201ENST00000602085 372 ntBASIC5.26□□□□□ -1.57
CDH4P55283 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.26□□□□□ -1.57
CDH4P55283 AC092944.2-201ENST00000605443 889 ntBASIC5.26□□□□□ -1.57
CDH4P55283 AL445222.1-201ENST00000607259 628 ntBASIC5.26□□□□□ -1.57
CDH4P55283 AC068870.2-201ENST00000620635 389 ntBASIC5.26□□□□□ -1.57
CDH4P55283 AC138965.3-201ENST00000623875 498 ntBASIC5.26□□□□□ -1.57
CDH4P55283 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.26□□□□□ -1.57
CDH4P55283 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH4P55283 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH4P55283 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CDH4P55283 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
CDH4P55283 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDH4P55283 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.26□□□□□ -1.57
CDH4P55283 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH4P55283 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH4P55283 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.26□□□□□ -1.57
CDH4P55283 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
CDH4P55283 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH4P55283 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CDH4P55283 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CDH4P55283 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH4P55283 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.25□□□□□ -1.57
CDH4P55283 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
CDH4P55283 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CDH4P55283 AP001029.2-203ENST00000589795 4910 ntBASIC5.25□□□□□ -1.57
CDH4P55283 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CDH4P55283 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CDH4P55283 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH4P55283 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.25□□□□□ -1.57
CDH4P55283 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH4P55283 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH4P55283 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH4P55283 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.25□□□□□ -1.57
CDH4P55283 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.25□□□□□ -1.57
CDH4P55283 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.25□□□□□ -1.57
CDH4P55283 AC092647.3-201ENST00000443044 633 ntBASIC5.25□□□□□ -1.57
CDH4P55283 HMGN2P25-201ENST00000486956 268 ntBASIC5.25□□□□□ -1.57
CDH4P55283 RN7SL808P-201ENST00000496066 299 ntBASIC5.25□□□□□ -1.57
CDH4P55283 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
CDH4P55283 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.25□□□□□ -1.57
CDH4P55283 RN7SKP147-201ENST00000517154 244 ntBASIC5.25□□□□□ -1.57
CDH4P55283 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.25□□□□□ -1.57
CDH4P55283 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.25□□□□□ -1.57
CDH4P55283 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CDH4P55283 AC010503.3-201ENST00000594355 540 ntBASIC5.25□□□□□ -1.57
CDH4P55283 AL451049.1-201ENST00000608672 497 ntBASIC5.25□□□□□ -1.57
CDH4P55283 AC093799.2-201ENST00000610062 578 ntBASIC5.25□□□□□ -1.57
CDH4P55283 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.25□□□□□ -1.57
CDH4P55283 AC026367.3-201ENST00000619032 590 ntBASIC5.25□□□□□ -1.57
CDH4P55283 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CDH4P55283 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CDH4P55283 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CDH4P55283 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.25□□□□□ -1.57
CDH4P55283 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CDH4P55283 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.25□□□□□ -1.57
CDH4P55283 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CDH4P55283 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH4P55283 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CDH4P55283 SMG1P7-201ENST00000565246 2704 ntBASIC5.25□□□□□ -1.57
CDH4P55283 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH4P55283 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.24□□□□□ -1.57
CDH4P55283 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH4P55283 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
CDH4P55283 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH4P55283 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CDH4P55283 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.24□□□□□ -1.57
CDH4P55283 AC008079.2-201ENST00000623543 20396 ntBASIC5.24□□□□□ -1.57
CDH4P55283 SNORA74A-201ENST00000364089 198 ntBASIC5.24□□□□□ -1.57
CDH4P55283 RNU4-4P-201ENST00000364588 130 ntBASIC5.24□□□□□ -1.57
CDH4P55283 AL353625.1-202ENST00000366273 571 ntBASIC5.24□□□□□ -1.57
CDH4P55283 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH4P55283 SNORA2.3-201ENST00000383920 135 ntBASIC5.24□□□□□ -1.57
CDH4P55283 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.24□□□□□ -1.57
CDH4P55283 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.24□□□□□ -1.57
CDH4P55283 AL136231.1-201ENST00000429407 730 ntBASIC5.24□□□□□ -1.57
CDH4P55283 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH4P55283 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CDH4P55283 AC046176.1-201ENST00000435260 1170 ntBASIC5.24□□□□□ -1.57
CDH4P55283 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.24□□□□□ -1.57
CDH4P55283 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH4P55283 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH4P55283 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms