Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
GTF2A1P52655 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
GTF2A1P52655 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
GTF2A1P52655 DHX9P1-201ENST00000436565 3076 ntBASIC4.93□□□□□ -1.62
GTF2A1P52655 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
GTF2A1P52655 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
GTF2A1P52655 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
GTF2A1P52655 MAPK10-304ENST00000641341 3984 ntBASIC4.92□□□□□ -1.62
GTF2A1P52655 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
GTF2A1P52655 OR7E25P-201ENST00000344844 931 ntBASIC4.92□□□□□ -1.62
GTF2A1P52655 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
GTF2A1P52655 RN7SKP257-201ENST00000364525 309 ntBASIC4.92□□□□□ -1.62
GTF2A1P52655 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
GTF2A1P52655 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC4.92□□□□□ -1.62
GTF2A1P52655 RPS6P12-201ENST00000432491 726 ntBASIC4.92□□□□□ -1.62
GTF2A1P52655 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.92□□□□□ -1.62
GTF2A1P52655 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.92□□□□□ -1.62
GTF2A1P52655 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.92□□□□□ -1.62
GTF2A1P52655 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.92□□□□□ -1.62
GTF2A1P52655 AC239809.1-201ENST00000450470 217 ntBASIC4.92□□□□□ -1.62
GTF2A1P52655 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC4.92□□□□□ -1.62
GTF2A1P52655 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.92□□□□□ -1.62
GTF2A1P52655 RN7SL727P-201ENST00000482164 296 ntBASIC4.92□□□□□ -1.62
GTF2A1P52655 AC009120.1-201ENST00000493458 473 ntBASIC4.92□□□□□ -1.62
GTF2A1P52655 AC112484.3-201ENST00000505910 329 ntBASIC4.92□□□□□ -1.62
GTF2A1P52655 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.92□□□□□ -1.62
GTF2A1P52655 AC021678.3-201ENST00000517893 476 ntBASIC4.92□□□□□ -1.62
GTF2A1P52655 IGKV3D-25-201ENST00000519599 235 ntBASIC4.92□□□□□ -1.62
GTF2A1P52655 OLR1-209ENST00000543993 822 ntTSL 2 BASIC4.92□□□□□ -1.62
GTF2A1P52655 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.92□□□□□ -1.62
GTF2A1P52655 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.92□□□□□ -1.62
GTF2A1P52655 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC4.92□□□□□ -1.62
GTF2A1P52655 AL512413.1-201ENST00000606489 382 ntBASIC4.92□□□□□ -1.62
GTF2A1P52655 AC090607.5-201ENST00000615692 224 ntBASIC4.92□□□□□ -1.62
GTF2A1P52655 MIR6715B-201ENST00000637172 77 ntBASIC4.92□□□□□ -1.62
GTF2A1P52655 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC4.92□□□□□ -1.62
GTF2A1P52655 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
GTF2A1P52655 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
GTF2A1P52655 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.91□□□□□ -1.62
GTF2A1P52655 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.91□□□□□ -1.62
GTF2A1P52655 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
GTF2A1P52655 AC090971.4-201ENST00000560291 1800 ntBASIC4.91□□□□□ -1.62
GTF2A1P52655 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
GTF2A1P52655 RNA5SP500-201ENST00000364486 119 ntBASIC4.91□□□□□ -1.62
GTF2A1P52655 SNORA66-201ENST00000384792 133 ntBASIC4.91□□□□□ -1.62
GTF2A1P52655 GCNT1P4-201ENST00000404096 329 ntBASIC4.91□□□□□ -1.62
GTF2A1P52655 RN7SKP216-201ENST00000411050 312 ntBASIC4.91□□□□□ -1.62
GTF2A1P52655 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.91□□□□□ -1.62
GTF2A1P52655 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.91□□□□□ -1.62
GTF2A1P52655 AC126120.1-201ENST00000431082 470 ntBASIC4.91□□□□□ -1.62
GTF2A1P52655 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.91□□□□□ -1.62
GTF2A1P52655 GAPDHP58-201ENST00000438477 1006 ntBASIC4.91□□□□□ -1.62
GTF2A1P52655 AC064862.5-201ENST00000440618 334 ntBASIC4.91□□□□□ -1.62
GTF2A1P52655 RPL7AP61-201ENST00000443410 636 ntBASIC4.91□□□□□ -1.62
GTF2A1P52655 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.91□□□□□ -1.62
GTF2A1P52655 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC4.91□□□□□ -1.62
GTF2A1P52655 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.91□□□□□ -1.62
GTF2A1P52655 OTX2P1-201ENST00000450956 354 ntBASIC4.91□□□□□ -1.62
GTF2A1P52655 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.91□□□□□ -1.62
GTF2A1P52655 RPSAP37-201ENST00000470913 821 ntBASIC4.91□□□□□ -1.62
GTF2A1P52655 RN7SL362P-201ENST00000494228 267 ntBASIC4.91□□□□□ -1.62
GTF2A1P52655 AC113367.2-201ENST00000505749 160 ntBASIC4.91□□□□□ -1.62
GTF2A1P52655 AL592156.1-201ENST00000508758 304 ntBASIC4.91□□□□□ -1.62
GTF2A1P52655 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.91□□□□□ -1.62
GTF2A1P52655 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
GTF2A1P52655 SCARNA6.1-201ENST00000516989 238 ntBASIC4.91□□□□□ -1.62
GTF2A1P52655 AC113191.1-201ENST00000517759 403 ntBASIC4.91□□□□□ -1.62
GTF2A1P52655 WBP1LP3-201ENST00000523033 208 ntBASIC4.91□□□□□ -1.62
GTF2A1P52655 AC090819.1-201ENST00000523800 1111 ntBASIC4.91□□□□□ -1.62
GTF2A1P52655 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC4.91□□□□□ -1.62
GTF2A1P52655 PCNAP4-201ENST00000532690 730 ntBASIC4.91□□□□□ -1.62
GTF2A1P52655 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.91□□□□□ -1.62
GTF2A1P52655 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.91□□□□□ -1.62
GTF2A1P52655 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.91□□□□□ -1.62
GTF2A1P52655 AL352979.3-201ENST00000553515 247 ntBASIC4.91□□□□□ -1.62
GTF2A1P52655 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.91□□□□□ -1.62
GTF2A1P52655 AL356801.1-201ENST00000559320 294 ntBASIC4.91□□□□□ -1.62
GTF2A1P52655 AC079075.1-201ENST00000559543 878 ntBASIC4.91□□□□□ -1.62
GTF2A1P52655 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.91□□□□□ -1.62
GTF2A1P52655 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC4.91□□□□□ -1.62
GTF2A1P52655 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.91□□□□□ -1.62
GTF2A1P52655 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.91□□□□□ -1.62
GTF2A1P52655 MIR4260-201ENST00000583107 67 ntBASIC4.91□□□□□ -1.62
GTF2A1P52655 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC4.91□□□□□ -1.62
GTF2A1P52655 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.91□□□□□ -1.62
GTF2A1P52655 AC108673.3-201ENST00000609183 335 ntBASIC4.91□□□□□ -1.62
GTF2A1P52655 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.91□□□□□ -1.62
GTF2A1P52655 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC4.91□□□□□ -1.62
GTF2A1P52655 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
GTF2A1P52655 AC067852.7-201ENST00000623270 535 ntBASIC4.91□□□□□ -1.62
GTF2A1P52655 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC4.91□□□□□ -1.62
GTF2A1P52655 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC4.91□□□□□ -1.62
GTF2A1P52655 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
GTF2A1P52655 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
GTF2A1P52655 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
GTF2A1P52655 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
GTF2A1P52655 PDZK1P1-202ENST00000425209 1350 ntBASIC4.91□□□□□ -1.62
GTF2A1P52655 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.91□□□□□ -1.62
GTF2A1P52655 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
GTF2A1P52655 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.9□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms