Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 ATP5F1P7-201ENST00000567330 760 ntBASIC5.99□□□□□ -1.45
NEK3P51956 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.99□□□□□ -1.45
NEK3P51956 AC011492.1-201ENST00000600023 315 ntBASIC5.99□□□□□ -1.45
NEK3P51956 AC096586.1-201ENST00000610267 561 ntBASIC5.99□□□□□ -1.45
NEK3P51956 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.99□□□□□ -1.45
NEK3P51956 AC139769.3-201ENST00000618383 175 ntBASIC5.99□□□□□ -1.45
NEK3P51956 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.99□□□□□ -1.45
NEK3P51956 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.99□□□□□ -1.45
NEK3P51956 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.99□□□□□ -1.45
NEK3P51956 OR8G3P-202ENST00000641572 1255 ntBASIC5.99□□□□□ -1.45
NEK3P51956 AC079776.5-201ENST00000641920 211 ntBASIC5.99□□□□□ -1.45
NEK3P51956 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NEK3P51956 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.99□□□□□ -1.45
NEK3P51956 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NEK3P51956 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.99□□□□□ -1.45
NEK3P51956 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
NEK3P51956 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
NEK3P51956 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
NEK3P51956 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NEK3P51956 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NEK3P51956 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NEK3P51956 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NEK3P51956 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.98□□□□□ -1.45
NEK3P51956 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NEK3P51956 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
NEK3P51956 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
NEK3P51956 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
NEK3P51956 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
NEK3P51956 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NEK3P51956 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
NEK3P51956 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NEK3P51956 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NEK3P51956 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NEK3P51956 MIR133A2-201ENST00000347538 102 ntBASIC5.98□□□□□ -1.45
NEK3P51956 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
NEK3P51956 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NEK3P51956 AL031985.1-201ENST00000392713 418 ntBASIC5.98□□□□□ -1.45
NEK3P51956 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.98□□□□□ -1.45
NEK3P51956 RMRPP5-201ENST00000411156 267 ntBASIC5.98□□□□□ -1.45
NEK3P51956 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.98□□□□□ -1.45
NEK3P51956 METTL15P3-201ENST00000415522 1221 ntBASIC5.98□□□□□ -1.45
NEK3P51956 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.98□□□□□ -1.45
NEK3P51956 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.98□□□□□ -1.45
NEK3P51956 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.98□□□□□ -1.45
NEK3P51956 BX323845.3-201ENST00000428215 527 ntBASIC5.98□□□□□ -1.45
NEK3P51956 MTND6P12-201ENST00000428247 522 ntBASIC5.98□□□□□ -1.45
NEK3P51956 AC092447.2-201ENST00000435487 669 ntBASIC5.98□□□□□ -1.45
NEK3P51956 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.98□□□□□ -1.45
NEK3P51956 FABP5P3-201ENST00000437960 408 ntBASIC5.98□□□□□ -1.45
NEK3P51956 CYCSP51-201ENST00000443545 318 ntBASIC5.98□□□□□ -1.45
NEK3P51956 RPL12P39-201ENST00000455456 496 ntBASIC5.98□□□□□ -1.45
NEK3P51956 PDCL3P4-201ENST00000489621 720 ntBASIC5.98□□□□□ -1.45
NEK3P51956 RPL7P51-201ENST00000490532 749 ntBASIC5.98□□□□□ -1.45
NEK3P51956 RN7SL57P-201ENST00000493687 290 ntBASIC5.98□□□□□ -1.45
NEK3P51956 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NEK3P51956 AC010627.1-201ENST00000503819 1294 ntBASIC5.98□□□□□ -1.45
NEK3P51956 GAPDHP71-201ENST00000511530 1003 ntBASIC5.98□□□□□ -1.45
NEK3P51956 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.98□□□□□ -1.45
NEK3P51956 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.98□□□□□ -1.45
NEK3P51956 IGLVIV-64-201ENST00000518581 301 ntBASIC5.98□□□□□ -1.45
NEK3P51956 AC078899.1-201ENST00000521432 1185 ntBASIC5.98□□□□□ -1.45
NEK3P51956 IGKV3D-34-201ENST00000522638 302 ntBASIC5.98□□□□□ -1.45
NEK3P51956 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC5.98□□□□□ -1.45
NEK3P51956 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.98□□□□□ -1.45
NEK3P51956 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.98□□□□□ -1.45
NEK3P51956 AL356801.1-201ENST00000559320 294 ntBASIC5.98□□□□□ -1.45
NEK3P51956 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.98□□□□□ -1.45
NEK3P51956 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.98□□□□□ -1.45
NEK3P51956 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.98□□□□□ -1.45
NEK3P51956 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
NEK3P51956 MIR3614-201ENST00000581261 86 ntBASIC5.98□□□□□ -1.45
NEK3P51956 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.98□□□□□ -1.45
NEK3P51956 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.98□□□□□ -1.45
NEK3P51956 FAM27E4-201ENST00000605259 342 ntBASIC5.98□□□□□ -1.45
NEK3P51956 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.98□□□□□ -1.45
NEK3P51956 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.98□□□□□ -1.45
NEK3P51956 uc_338.26-201ENST00000612659 160 ntBASIC5.98□□□□□ -1.45
NEK3P51956 AC024595.1-201ENST00000623088 387 ntBASIC5.98□□□□□ -1.45
NEK3P51956 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.98□□□□□ -1.45
NEK3P51956 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.98□□□□□ -1.45
NEK3P51956 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NEK3P51956 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
NEK3P51956 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
NEK3P51956 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NEK3P51956 AL158152.1-201ENST00000602652 1435 ntBASIC5.98□□□□□ -1.45
NEK3P51956 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
NEK3P51956 AC114774.1-201ENST00000507410 1770 ntBASIC5.98□□□□□ -1.45
NEK3P51956 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NEK3P51956 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NEK3P51956 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
NEK3P51956 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NEK3P51956 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
NEK3P51956 PDZK1P1-202ENST00000425209 1350 ntBASIC5.97□□□□□ -1.45
NEK3P51956 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.97□□□□□ -1.45
NEK3P51956 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.97□□□□□ -1.45
NEK3P51956 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.97□□□□□ -1.45
NEK3P51956 AL445437.1-201ENST00000623157 3087 ntBASIC5.97□□□□□ -1.45
NEK3P51956 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
NEK3P51956 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
NEK3P51956 RNU1-74P-201ENST00000384108 171 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms