Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.48□□□□□ -1.53
CASP4P49662 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.48□□□□□ -1.53
CASP4P49662 RPS29P9-201ENST00000440360 171 ntBASIC5.48□□□□□ -1.53
CASP4P49662 CYCSP24-201ENST00000445119 316 ntBASIC5.48□□□□□ -1.53
CASP4P49662 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.48□□□□□ -1.53
CASP4P49662 RN7SL515P-201ENST00000463999 297 ntBASIC5.48□□□□□ -1.53
CASP4P49662 AC004980.4-201ENST00000513375 203 ntBASIC5.48□□□□□ -1.53
CASP4P49662 RNA5SP43-201ENST00000516559 110 ntBASIC5.48□□□□□ -1.53
CASP4P49662 OR10G5P-201ENST00000532733 358 ntBASIC5.48□□□□□ -1.53
CASP4P49662 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.48□□□□□ -1.53
CASP4P49662 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.48□□□□□ -1.53
CASP4P49662 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.48□□□□□ -1.53
CASP4P49662 MIR4691-201ENST00000583764 85 ntBASIC5.48□□□□□ -1.53
CASP4P49662 OR7E18P-201ENST00000592589 702 ntBASIC5.48□□□□□ -1.53
CASP4P49662 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.48□□□□□ -1.53
CASP4P49662 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.48□□□□□ -1.53
CASP4P49662 SDR42E1P1-201ENST00000611327 477 ntBASIC5.48□□□□□ -1.53
CASP4P49662 MIR6719-201ENST00000622428 87 ntBASIC5.48□□□□□ -1.53
CASP4P49662 AC009950.2-201ENST00000636548 183 ntBASIC5.48□□□□□ -1.53
CASP4P49662 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
CASP4P49662 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CASP4P49662 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.48□□□□□ -1.53
CASP4P49662 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CASP4P49662 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CASP4P49662 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CASP4P49662 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CASP4P49662 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.48□□□□□ -1.53
CASP4P49662 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.48□□□□□ -1.53
CASP4P49662 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CASP4P49662 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CASP4P49662 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.48□□□□□ -1.53
CASP4P49662 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CASP4P49662 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CASP4P49662 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.47□□□□□ -1.53
CASP4P49662 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CASP4P49662 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.47□□□□□ -1.53
CASP4P49662 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CASP4P49662 MIR765-201ENST00000390226 114 ntBASIC5.47□□□□□ -1.53
CASP4P49662 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.47□□□□□ -1.53
CASP4P49662 AC013268.2-201ENST00000420753 337 ntBASIC5.47□□□□□ -1.53
CASP4P49662 DDX39BP1-205ENST00000422507 192 ntBASIC5.47□□□□□ -1.53
CASP4P49662 NPM1P48-201ENST00000436002 853 ntBASIC5.47□□□□□ -1.53
CASP4P49662 TCEA1P3-201ENST00000443005 880 ntBASIC5.47□□□□□ -1.53
CASP4P49662 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.47□□□□□ -1.53
CASP4P49662 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.47□□□□□ -1.53
CASP4P49662 VN1R96P-201ENST00000446052 858 ntBASIC5.47□□□□□ -1.53
CASP4P49662 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CASP4P49662 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.47□□□□□ -1.53
CASP4P49662 AC138409.2-202ENST00000507274 458 ntBASIC5.47□□□□□ -1.53
CASP4P49662 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.47□□□□□ -1.53
CASP4P49662 AC110775.1-201ENST00000513721 462 ntBASIC5.47□□□□□ -1.53
CASP4P49662 SNORA70.11-201ENST00000515987 138 ntBASIC5.47□□□□□ -1.53
CASP4P49662 SNORA70.13-201ENST00000516116 138 ntBASIC5.47□□□□□ -1.53
CASP4P49662 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.47□□□□□ -1.53
CASP4P49662 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.47□□□□□ -1.53
CASP4P49662 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC5.47□□□□□ -1.53
CASP4P49662 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.47□□□□□ -1.53
CASP4P49662 AC092490.3-201ENST00000545370 572 ntBASIC5.47□□□□□ -1.53
CASP4P49662 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.47□□□□□ -1.53
CASP4P49662 AC116553.2-201ENST00000564203 463 ntBASIC5.47□□□□□ -1.53
CASP4P49662 AC010503.3-201ENST00000594355 540 ntBASIC5.47□□□□□ -1.53
CASP4P49662 AP000648.2-201ENST00000624182 404 ntBASIC5.47□□□□□ -1.53
CASP4P49662 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.47□□□□□ -1.53
CASP4P49662 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CASP4P49662 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CASP4P49662 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CASP4P49662 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.47□□□□□ -1.53
CASP4P49662 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.47□□□□□ -1.53
CASP4P49662 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.46□□□□□ -1.53
CASP4P49662 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
CASP4P49662 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.46□□□□□ -1.53
CASP4P49662 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CASP4P49662 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CASP4P49662 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CASP4P49662 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.46□□□□□ -1.54
CASP4P49662 Z68694.1-201ENST00000413929 841 ntBASIC5.46□□□□□ -1.54
CASP4P49662 QRSL1P2-201ENST00000418582 964 ntBASIC5.46□□□□□ -1.54
CASP4P49662 AC013429.2-201ENST00000418798 781 ntBASIC5.46□□□□□ -1.54
CASP4P49662 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.46□□□□□ -1.54
CASP4P49662 AC104333.2-201ENST00000422630 192 ntBASIC5.46□□□□□ -1.54
CASP4P49662 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.46□□□□□ -1.54
CASP4P49662 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.46□□□□□ -1.54
CASP4P49662 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.46□□□□□ -1.54
CASP4P49662 AL354714.3-201ENST00000447284 493 ntBASIC5.46□□□□□ -1.54
CASP4P49662 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.46□□□□□ -1.54
CASP4P49662 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.46□□□□□ -1.54
CASP4P49662 AL356981.1-201ENST00000454879 684 ntBASIC5.46□□□□□ -1.54
CASP4P49662 RPSAP50-201ENST00000481955 852 ntBASIC5.46□□□□□ -1.54
CASP4P49662 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.46□□□□□ -1.54
CASP4P49662 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
CASP4P49662 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.46□□□□□ -1.54
CASP4P49662 OR7E128P-201ENST00000532736 1024 ntBASIC5.46□□□□□ -1.54
CASP4P49662 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.46□□□□□ -1.54
CASP4P49662 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CASP4P49662 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.46□□□□□ -1.54
CASP4P49662 AC093799.2-201ENST00000610062 578 ntBASIC5.46□□□□□ -1.54
CASP4P49662 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.46□□□□□ -1.54
CASP4P49662 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CASP4P49662 AC068446.1-201ENST00000556425 1549 ntBASIC5.46□□□□□ -1.54
CASP4P49662 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms