Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
APOBEC1P41238 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.99□□□□□ -1.61
APOBEC1P41238 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.99□□□□□ -1.61
APOBEC1P41238 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
APOBEC1P41238 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.98□□□□□ -1.61
APOBEC1P41238 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
APOBEC1P41238 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
APOBEC1P41238 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
APOBEC1P41238 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
APOBEC1P41238 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.98□□□□□ -1.61
APOBEC1P41238 RNU4-7P-201ENST00000364758 141 ntBASIC4.98□□□□□ -1.61
APOBEC1P41238 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
APOBEC1P41238 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
APOBEC1P41238 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.98□□□□□ -1.61
APOBEC1P41238 MT-TP-201ENST00000387461 68 ntBASIC4.98□□□□□ -1.61
APOBEC1P41238 RN7SKP293-201ENST00000411389 296 ntBASIC4.98□□□□□ -1.61
APOBEC1P41238 AL133482.1-201ENST00000415988 498 ntBASIC4.98□□□□□ -1.61
APOBEC1P41238 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.98□□□□□ -1.61
APOBEC1P41238 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.98□□□□□ -1.61
APOBEC1P41238 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.98□□□□□ -1.61
APOBEC1P41238 VN1R42P-201ENST00000424651 344 ntBASIC4.98□□□□□ -1.61
APOBEC1P41238 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.98□□□□□ -1.61
APOBEC1P41238 AC104843.2-201ENST00000427666 297 ntBASIC4.98□□□□□ -1.61
APOBEC1P41238 RPL12P17-201ENST00000432393 498 ntBASIC4.98□□□□□ -1.61
APOBEC1P41238 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.98□□□□□ -1.61
APOBEC1P41238 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.98□□□□□ -1.61
APOBEC1P41238 RPL6P5-201ENST00000445678 828 ntBASIC4.98□□□□□ -1.61
APOBEC1P41238 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
APOBEC1P41238 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
APOBEC1P41238 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.98□□□□□ -1.61
APOBEC1P41238 CALM1P2-201ENST00000452941 448 ntBASIC4.98□□□□□ -1.61
APOBEC1P41238 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
APOBEC1P41238 AC090602.1-201ENST00000469695 252 ntBASIC4.98□□□□□ -1.61
APOBEC1P41238 PPM1AP1-201ENST00000502740 1135 ntBASIC4.98□□□□□ -1.61
APOBEC1P41238 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.98□□□□□ -1.61
APOBEC1P41238 AC021106.1-201ENST00000509020 1058 ntBASIC4.98□□□□□ -1.61
APOBEC1P41238 TPT1P8-201ENST00000510120 555 ntBASIC4.98□□□□□ -1.61
APOBEC1P41238 RN7SKP99-201ENST00000517028 307 ntBASIC4.98□□□□□ -1.61
APOBEC1P41238 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.98□□□□□ -1.61
APOBEC1P41238 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.98□□□□□ -1.61
APOBEC1P41238 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
APOBEC1P41238 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
APOBEC1P41238 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.98□□□□□ -1.61
APOBEC1P41238 AC022404.1-201ENST00000555320 273 ntBASIC4.98□□□□□ -1.61
APOBEC1P41238 GLRXP2-201ENST00000555594 321 ntBASIC4.98□□□□□ -1.61
APOBEC1P41238 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.98□□□□□ -1.61
APOBEC1P41238 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.98□□□□□ -1.61
APOBEC1P41238 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.98□□□□□ -1.61
APOBEC1P41238 MIR1273E-201ENST00000581165 102 ntBASIC4.98□□□□□ -1.61
APOBEC1P41238 MIR7853-201ENST00000584820 132 ntBASIC4.98□□□□□ -1.61
APOBEC1P41238 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.98□□□□□ -1.61
APOBEC1P41238 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.98□□□□□ -1.61
APOBEC1P41238 AL158050.2-201ENST00000605336 568 ntBASIC4.98□□□□□ -1.61
APOBEC1P41238 AC017076.1-201ENST00000607613 578 ntBASIC4.98□□□□□ -1.61
APOBEC1P41238 AP000864.1-201ENST00000609424 650 ntBASIC4.98□□□□□ -1.61
APOBEC1P41238 AC016597.2-201ENST00000613256 341 ntBASIC4.98□□□□□ -1.61
APOBEC1P41238 AL118522.2-201ENST00000616045 615 ntBASIC4.98□□□□□ -1.61
APOBEC1P41238 MIR6133-201ENST00000617057 108 ntBASIC4.98□□□□□ -1.61
APOBEC1P41238 AC132068.1-201ENST00000623805 459 ntBASIC4.98□□□□□ -1.61
APOBEC1P41238 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
APOBEC1P41238 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.98□□□□□ -1.61
APOBEC1P41238 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
APOBEC1P41238 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
APOBEC1P41238 AC006206.1-201ENST00000544842 3387 ntBASIC4.98□□□□□ -1.61
APOBEC1P41238 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.98□□□□□ -1.61
APOBEC1P41238 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
APOBEC1P41238 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
APOBEC1P41238 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
APOBEC1P41238 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
APOBEC1P41238 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
APOBEC1P41238 MTND5P11-201ENST00000511037 1812 ntBASIC4.97□□□□□ -1.61
APOBEC1P41238 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.97□□□□□ -1.61
APOBEC1P41238 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.97□□□□□ -1.61
APOBEC1P41238 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
APOBEC1P41238 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.97□□□□□ -1.61
APOBEC1P41238 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
APOBEC1P41238 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
APOBEC1P41238 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
APOBEC1P41238 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
APOBEC1P41238 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
APOBEC1P41238 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
APOBEC1P41238 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
APOBEC1P41238 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
APOBEC1P41238 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
APOBEC1P41238 AC004158.1-201ENST00000564508 4319 ntBASIC4.97□□□□□ -1.61
APOBEC1P41238 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
APOBEC1P41238 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
APOBEC1P41238 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.97□□□□□ -1.61
APOBEC1P41238 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
APOBEC1P41238 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
APOBEC1P41238 RNU6-1000P-201ENST00000391066 106 ntBASIC4.97□□□□□ -1.61
APOBEC1P41238 U3.23-201ENST00000391132 200 ntBASIC4.97□□□□□ -1.61
APOBEC1P41238 SNORA17A-201ENST00000391185 133 ntBASIC4.97□□□□□ -1.61
APOBEC1P41238 RPSAP35-201ENST00000413753 818 ntBASIC4.97□□□□□ -1.61
APOBEC1P41238 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.97□□□□□ -1.61
APOBEC1P41238 HMGB3P10-201ENST00000434734 572 ntBASIC4.97□□□□□ -1.61
APOBEC1P41238 NDUFB4P8-201ENST00000435351 367 ntBASIC4.97□□□□□ -1.61
APOBEC1P41238 RPL12P11-201ENST00000439970 501 ntBASIC4.97□□□□□ -1.61
APOBEC1P41238 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.97□□□□□ -1.61
APOBEC1P41238 AC019185.1-201ENST00000442718 389 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms