Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 AC007342.8-201ENST00000623278 678 ntBASIC6.32□□□□□ -1.4
LTBRP36941 MFSD8-245ENST00000641743 948 ntBASIC6.32□□□□□ -1.4
LTBRP36941 AF131215.2-201ENST00000531549 1710 ntBASIC6.32□□□□□ -1.4
LTBRP36941 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.32□□□□□ -1.4
LTBRP36941 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.32□□□□□ -1.4
LTBRP36941 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
LTBRP36941 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.32□□□□□ -1.4
LTBRP36941 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
LTBRP36941 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
LTBRP36941 AL023806.3-201ENST00000638502 2704 ntBASIC6.32□□□□□ -1.4
LTBRP36941 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC6.32□□□□□ -1.4
LTBRP36941 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC6.32□□□□□ -1.4
LTBRP36941 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
LTBRP36941 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
LTBRP36941 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
LTBRP36941 AC010401.2-201ENST00000575137 4934 ntBASIC6.31□□□□□ -1.4
LTBRP36941 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
LTBRP36941 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
LTBRP36941 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
LTBRP36941 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC6.31□□□□□ -1.4
LTBRP36941 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
LTBRP36941 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC6.31□□□□□ -1.4
LTBRP36941 KARSP3-201ENST00000571212 1504 ntBASIC6.31□□□□□ -1.4
LTBRP36941 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.31□□□□□ -1.4
LTBRP36941 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC6.31□□□□□ -1.4
LTBRP36941 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
LTBRP36941 AC005332.9-201ENST00000620266 2921 ntBASIC6.31□□□□□ -1.4
LTBRP36941 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
LTBRP36941 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
LTBRP36941 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
LTBRP36941 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
LTBRP36941 OR52B5P-204ENST00000641744 3467 ntBASIC6.31□□□□□ -1.4
LTBRP36941 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
LTBRP36941 AP000776.1-201ENST00000530032 1663 ntBASIC6.31□□□□□ -1.4
LTBRP36941 RNU6-543P-201ENST00000362576 108 ntBASIC6.31□□□□□ -1.4
LTBRP36941 RNU105B-201ENST00000364478 208 ntBASIC6.31□□□□□ -1.4
LTBRP36941 RNU6-452P-201ENST00000384406 107 ntBASIC6.31□□□□□ -1.4
LTBRP36941 Y_RNA.560-201ENST00000384689 102 ntBASIC6.31□□□□□ -1.4
LTBRP36941 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
LTBRP36941 AC016739.1-201ENST00000405359 345 ntBASIC6.31□□□□□ -1.4
LTBRP36941 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
LTBRP36941 RPS15AP30-201ENST00000420976 390 ntBASIC6.31□□□□□ -1.4
LTBRP36941 AL139421.1-201ENST00000423010 169 ntBASIC6.31□□□□□ -1.4
LTBRP36941 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC6.31□□□□□ -1.4
LTBRP36941 CNOT7P1-201ENST00000429006 852 ntBASIC6.31□□□□□ -1.4
LTBRP36941 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
LTBRP36941 AC244035.1-201ENST00000430042 390 ntBASIC6.31□□□□□ -1.4
LTBRP36941 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.31□□□□□ -1.4
LTBRP36941 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC6.31□□□□□ -1.4
LTBRP36941 AL353093.1-201ENST00000441292 436 ntBASIC6.31□□□□□ -1.4
LTBRP36941 RPL23AP76-201ENST00000441860 458 ntBASIC6.31□□□□□ -1.4
LTBRP36941 H2AFZP6-201ENST00000444403 394 ntBASIC6.31□□□□□ -1.4
LTBRP36941 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
LTBRP36941 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC6.31□□□□□ -1.4
LTBRP36941 AC005532.2-201ENST00000467154 373 ntBASIC6.31□□□□□ -1.4
LTBRP36941 GAPDHP36-201ENST00000480688 918 ntBASIC6.31□□□□□ -1.4
LTBRP36941 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.31□□□□□ -1.4
LTBRP36941 AC104108.1-201ENST00000509930 412 ntBASIC6.31□□□□□ -1.4
LTBRP36941 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.31□□□□□ -1.4
LTBRP36941 KCTD9P4-201ENST00000526766 1166 ntBASIC6.31□□□□□ -1.4
LTBRP36941 AP001804.1-201ENST00000526868 919 ntBASIC6.31□□□□□ -1.4
LTBRP36941 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.31□□□□□ -1.4
LTBRP36941 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.31□□□□□ -1.4
LTBRP36941 AC025260.1-201ENST00000548858 430 ntBASIC6.31□□□□□ -1.4
LTBRP36941 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.31□□□□□ -1.4
LTBRP36941 ISCA1P3-201ENST00000577104 373 ntBASIC6.31□□□□□ -1.4
LTBRP36941 FKBP1AP1-201ENST00000594588 318 ntBASIC6.31□□□□□ -1.4
LTBRP36941 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.31□□□□□ -1.4
LTBRP36941 VN1R82P-201ENST00000601481 356 ntBASIC6.31□□□□□ -1.4
LTBRP36941 AL139286.2-201ENST00000606838 396 ntBASIC6.31□□□□□ -1.4
LTBRP36941 AC092653.1-201ENST00000608509 531 ntBASIC6.31□□□□□ -1.4
LTBRP36941 AC099676.1-201ENST00000608886 657 ntBASIC6.31□□□□□ -1.4
LTBRP36941 AC121761.2-201ENST00000617300 689 ntBASIC6.31□□□□□ -1.4
LTBRP36941 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.31□□□□□ -1.4
LTBRP36941 MIR4278-201ENST00000636094 69 ntBASIC6.31□□□□□ -1.4
LTBRP36941 AC087821.2-201ENST00000637086 450 ntBASIC6.31□□□□□ -1.4
LTBRP36941 AL034408.1-201ENST00000637712 664 ntBASIC6.31□□□□□ -1.4
LTBRP36941 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.31□□□□□ -1.4
LTBRP36941 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
LTBRP36941 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
LTBRP36941 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.31□□□□□ -1.4
LTBRP36941 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC6.31□□□□□ -1.4
LTBRP36941 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
LTBRP36941 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
LTBRP36941 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
LTBRP36941 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
LTBRP36941 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
LTBRP36941 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
LTBRP36941 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
LTBRP36941 ZNF733P-202ENST00000444809 1573 ntBASIC6.31□□□□□ -1.4
LTBRP36941 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
LTBRP36941 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
LTBRP36941 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
LTBRP36941 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LTBRP36941 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LTBRP36941 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.3□□□□□ -1.4
LTBRP36941 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LTBRP36941 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LTBRP36941 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LTBRP36941 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms