Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 RN7SKP125-201ENST00000410481 302 ntBASIC5.03□□□□□ -1.6
RORAP35398 MTND4LP21-201ENST00000415303 295 ntBASIC5.03□□□□□ -1.6
RORAP35398 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RORAP35398 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.03□□□□□ -1.6
RORAP35398 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.03□□□□□ -1.6
RORAP35398 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.03□□□□□ -1.6
RORAP35398 PSMD10P3-201ENST00000437000 448 ntBASIC5.03□□□□□ -1.6
RORAP35398 RPL12P3-201ENST00000440080 396 ntBASIC5.03□□□□□ -1.6
RORAP35398 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.03□□□□□ -1.6
RORAP35398 AC073850.1-201ENST00000449243 255 ntBASIC5.03□□□□□ -1.6
RORAP35398 AL591363.1-201ENST00000450091 483 ntBASIC5.03□□□□□ -1.6
RORAP35398 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.03□□□□□ -1.6
RORAP35398 AC079168.1-201ENST00000458741 345 ntBASIC5.03□□□□□ -1.6
RORAP35398 AC107015.1-201ENST00000466902 747 ntBASIC5.03□□□□□ -1.6
RORAP35398 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.03□□□□□ -1.6
RORAP35398 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.03□□□□□ -1.6
RORAP35398 RN7SKP34-201ENST00000516142 244 ntBASIC5.03□□□□□ -1.6
RORAP35398 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.03□□□□□ -1.6
RORAP35398 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.03□□□□□ -1.6
RORAP35398 EIF4EP5-201ENST00000528228 640 ntBASIC5.03□□□□□ -1.6
RORAP35398 AC018552.1-201ENST00000562099 811 ntBASIC5.03□□□□□ -1.6
RORAP35398 AC122134.1-201ENST00000565664 1104 ntBASIC5.03□□□□□ -1.6
RORAP35398 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.03□□□□□ -1.6
RORAP35398 MIR7853-201ENST00000584820 132 ntBASIC5.03□□□□□ -1.6
RORAP35398 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.03□□□□□ -1.6
RORAP35398 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RORAP35398 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RORAP35398 HSPA8P18-201ENST00000439846 1928 ntBASIC5.03□□□□□ -1.6
RORAP35398 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RORAP35398 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
RORAP35398 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
RORAP35398 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RORAP35398 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.02□□□□□ -1.61
RORAP35398 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RORAP35398 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RORAP35398 AC114947.2-201ENST00000565748 2125 ntBASIC5.02□□□□□ -1.61
RORAP35398 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.02□□□□□ -1.61
RORAP35398 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
RORAP35398 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.02□□□□□ -1.61
RORAP35398 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RORAP35398 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RORAP35398 SNORA70.6-201ENST00000383934 134 ntBASIC5.02□□□□□ -1.61
RORAP35398 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RORAP35398 HSPA8P15-201ENST00000401676 786 ntBASIC5.02□□□□□ -1.61
RORAP35398 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.02□□□□□ -1.61
RORAP35398 NPM1P40-201ENST00000412758 733 ntBASIC5.02□□□□□ -1.61
RORAP35398 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
RORAP35398 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.02□□□□□ -1.61
RORAP35398 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.02□□□□□ -1.61
RORAP35398 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.02□□□□□ -1.61
RORAP35398 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.02□□□□□ -1.61
RORAP35398 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.02□□□□□ -1.61
RORAP35398 AC009127.1-201ENST00000467090 155 ntBASIC5.02□□□□□ -1.61
RORAP35398 AC090114.3-201ENST00000479267 829 ntBASIC5.02□□□□□ -1.61
RORAP35398 RPL7P40-201ENST00000481703 745 ntBASIC5.02□□□□□ -1.61
RORAP35398 RPSAP51-201ENST00000497462 645 ntBASIC5.02□□□□□ -1.61
RORAP35398 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.02□□□□□ -1.61
RORAP35398 SEPT10P1-201ENST00000517342 1162 ntBASIC5.02□□□□□ -1.61
RORAP35398 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.02□□□□□ -1.61
RORAP35398 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.02□□□□□ -1.61
RORAP35398 OR8G3P-201ENST00000533406 921 ntBASIC5.02□□□□□ -1.61
RORAP35398 AC134349.2-201ENST00000535136 910 ntBASIC5.02□□□□□ -1.61
RORAP35398 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
RORAP35398 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.02□□□□□ -1.61
RORAP35398 AC084759.1-201ENST00000561168 290 ntBASIC5.02□□□□□ -1.61
RORAP35398 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.02□□□□□ -1.61
RORAP35398 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.02□□□□□ -1.61
RORAP35398 AC011447.4-201ENST00000587562 111 ntBASIC5.02□□□□□ -1.61
RORAP35398 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.02□□□□□ -1.61
RORAP35398 AC005252.1-201ENST00000604518 1063 ntBASIC5.02□□□□□ -1.61
RORAP35398 AC024940.4-201ENST00000605507 246 ntBASIC5.02□□□□□ -1.61
RORAP35398 AC090510.2-201ENST00000617465 629 ntBASIC5.02□□□□□ -1.61
RORAP35398 AL121890.2-201ENST00000617644 465 ntBASIC5.02□□□□□ -1.61
RORAP35398 AP001005.3-201ENST00000622049 129 ntBASIC5.02□□□□□ -1.61
RORAP35398 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.02□□□□□ -1.61
RORAP35398 AP002799.1-201ENST00000623552 423 ntBASIC5.02□□□□□ -1.61
RORAP35398 AP003400.3-201ENST00000624904 346 ntBASIC5.02□□□□□ -1.61
RORAP35398 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.02□□□□□ -1.61
RORAP35398 AC009950.2-201ENST00000636548 183 ntBASIC5.02□□□□□ -1.61
RORAP35398 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
RORAP35398 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RORAP35398 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RORAP35398 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RORAP35398 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RORAP35398 MUC2-202ENST00000613187 4845 ntBASIC5.02□□□□□ -1.61
RORAP35398 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RORAP35398 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RORAP35398 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RORAP35398 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RORAP35398 PANDAR-201ENST00000629595 1506 ntBASIC5.02□□□□□ -1.61
RORAP35398 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RORAP35398 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RORAP35398 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RORAP35398 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RORAP35398 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RORAP35398 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.01□□□□□ -1.61
RORAP35398 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.01□□□□□ -1.61
RORAP35398 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RORAP35398 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
RORAP35398 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms