Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFC1P35251 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFC1P35251 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.67□□□□□ -1.5
RFC1P35251 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFC1P35251 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFC1P35251 RN7SKP124-201ENST00000364730 341 ntBASIC5.67□□□□□ -1.5
RFC1P35251 SNORA5.1-201ENST00000384275 131 ntBASIC5.67□□□□□ -1.5
RFC1P35251 AL391422.1-201ENST00000402155 436 ntBASIC5.67□□□□□ -1.5
RFC1P35251 RN7SKP293-201ENST00000411389 296 ntBASIC5.67□□□□□ -1.5
RFC1P35251 AL354692.1-201ENST00000423044 315 ntBASIC5.67□□□□□ -1.5
RFC1P35251 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFC1P35251 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.67□□□□□ -1.5
RFC1P35251 RPL12P17-201ENST00000432393 498 ntBASIC5.67□□□□□ -1.5
RFC1P35251 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFC1P35251 GSTM5P1-201ENST00000434751 660 ntBASIC5.67□□□□□ -1.5
RFC1P35251 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.67□□□□□ -1.5
RFC1P35251 Z99127.2-201ENST00000441426 334 ntBASIC5.67□□□□□ -1.5
RFC1P35251 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.67□□□□□ -1.5
RFC1P35251 AC105399.1-202ENST00000447303 205 ntBASIC5.67□□□□□ -1.5
RFC1P35251 AL672138.1-201ENST00000450604 1015 ntBASIC5.67□□□□□ -1.5
RFC1P35251 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.67□□□□□ -1.5
RFC1P35251 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.67□□□□□ -1.5
RFC1P35251 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.67□□□□□ -1.5
RFC1P35251 AC018635.1-201ENST00000468292 1030 ntBASIC5.67□□□□□ -1.5
RFC1P35251 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFC1P35251 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.67□□□□□ -1.5
RFC1P35251 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.67□□□□□ -1.5
RFC1P35251 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.67□□□□□ -1.5
RFC1P35251 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RFC1P35251 AC093763.2-201ENST00000505334 1223 ntBASIC5.67□□□□□ -1.5
RFC1P35251 AC108157.1-201ENST00000510511 539 ntBASIC5.67□□□□□ -1.5
RFC1P35251 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.67□□□□□ -1.5
RFC1P35251 SCARNA16.4-201ENST00000516956 187 ntBASIC5.67□□□□□ -1.5
RFC1P35251 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.67□□□□□ -1.5
RFC1P35251 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.67□□□□□ -1.5
RFC1P35251 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.67□□□□□ -1.5
RFC1P35251 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RFC1P35251 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.67□□□□□ -1.5
RFC1P35251 AC000068.2-201ENST00000608816 460 ntBASIC5.67□□□□□ -1.5
RFC1P35251 AL391834.1-201ENST00000609609 560 ntBASIC5.67□□□□□ -1.5
RFC1P35251 AL355816.2-201ENST00000610049 647 ntBASIC5.67□□□□□ -1.5
RFC1P35251 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.67□□□□□ -1.5
RFC1P35251 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFC1P35251 AC026124.2-201ENST00000621847 656 ntBASIC5.67□□□□□ -1.5
RFC1P35251 AL691477.1-201ENST00000624398 162 ntBASIC5.67□□□□□ -1.5
RFC1P35251 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.67□□□□□ -1.5
RFC1P35251 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
RFC1P35251 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.67□□□□□ -1.5
RFC1P35251 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFC1P35251 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.67□□□□□ -1.5
RFC1P35251 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
RFC1P35251 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.67□□□□□ -1.5
RFC1P35251 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
RFC1P35251 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFC1P35251 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.67□□□□□ -1.5
RFC1P35251 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFC1P35251 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFC1P35251 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFC1P35251 AC110792.3-201ENST00000595906 1614 ntBASIC5.66□□□□□ -1.5
RFC1P35251 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFC1P35251 OR10AB1P-202ENST00000641219 1686 ntBASIC5.66□□□□□ -1.5
RFC1P35251 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RFC1P35251 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
RFC1P35251 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.66□□□□□ -1.5
RFC1P35251 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.66□□□□□ -1.5
RFC1P35251 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.66□□□□□ -1.5
RFC1P35251 KARSP1-201ENST00000451871 1752 ntBASIC5.66□□□□□ -1.5
RFC1P35251 RNA5SP319-201ENST00000362768 119 ntBASIC5.66□□□□□ -1.5
RFC1P35251 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.66□□□□□ -1.5
RFC1P35251 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
RFC1P35251 AL133388.1-201ENST00000404509 287 ntBASIC5.66□□□□□ -1.5
RFC1P35251 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.66□□□□□ -1.5
RFC1P35251 AL389925.1-201ENST00000432257 728 ntBASIC5.66□□□□□ -1.5
RFC1P35251 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.66□□□□□ -1.5
RFC1P35251 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.66□□□□□ -1.5
RFC1P35251 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.66□□□□□ -1.5
RFC1P35251 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.66□□□□□ -1.5
RFC1P35251 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.66□□□□□ -1.5
RFC1P35251 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.66□□□□□ -1.5
RFC1P35251 RN7SL466P-201ENST00000497546 295 ntBASIC5.66□□□□□ -1.5
RFC1P35251 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.66□□□□□ -1.5
RFC1P35251 HMGB1P44-201ENST00000508597 572 ntBASIC5.66□□□□□ -1.5
RFC1P35251 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.66□□□□□ -1.5
RFC1P35251 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.66□□□□□ -1.5
RFC1P35251 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.66□□□□□ -1.5
RFC1P35251 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.66□□□□□ -1.5
RFC1P35251 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.66□□□□□ -1.5
RFC1P35251 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.66□□□□□ -1.5
RFC1P35251 AC079298.2-201ENST00000623885 459 ntBASIC5.66□□□□□ -1.5
RFC1P35251 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.66□□□□□ -1.5
RFC1P35251 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.66□□□□□ -1.5
RFC1P35251 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.66□□□□□ -1.5
RFC1P35251 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFC1P35251 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFC1P35251 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.66□□□□□ -1.5
RFC1P35251 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RFC1P35251 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RFC1P35251 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.66□□□□□ -1.5
RFC1P35251 OR9K1P-202ENST00000641111 3217 ntBASIC5.66□□□□□ -1.5
RFC1P35251 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms