Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.03□□□□□ -1.6
PTPN6P29350 HAUS1P1-201ENST00000505275 832 ntBASIC5.03□□□□□ -1.6
PTPN6P29350 HMGB1P44-201ENST00000508597 572 ntBASIC5.03□□□□□ -1.6
PTPN6P29350 AL671862.1-201ENST00000515851 349 ntBASIC5.03□□□□□ -1.6
PTPN6P29350 RNU6-319P-201ENST00000516025 108 ntBASIC5.03□□□□□ -1.6
PTPN6P29350 FTH1P11-201ENST00000517577 551 ntBASIC5.03□□□□□ -1.6
PTPN6P29350 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.03□□□□□ -1.6
PTPN6P29350 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.03□□□□□ -1.6
PTPN6P29350 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PTPN6P29350 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.03□□□□□ -1.6
PTPN6P29350 SULT1C2P2-201ENST00000562517 294 ntBASIC5.03□□□□□ -1.6
PTPN6P29350 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
PTPN6P29350 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.03□□□□□ -1.6
PTPN6P29350 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PTPN6P29350 AC124856.1-201ENST00000600819 896 ntBASIC5.03□□□□□ -1.6
PTPN6P29350 SUGT1P3-202ENST00000604259 383 ntBASIC5.03□□□□□ -1.6
PTPN6P29350 AC009027.1-201ENST00000604510 479 ntBASIC5.03□□□□□ -1.6
PTPN6P29350 AL162431.4-201ENST00000604674 411 ntBASIC5.03□□□□□ -1.6
PTPN6P29350 AC011626.1-201ENST00000604710 562 ntBASIC5.03□□□□□ -1.6
PTPN6P29350 OR51C1P-201ENST00000608504 942 ntBASIC5.03□□□□□ -1.6
PTPN6P29350 AP000864.1-201ENST00000609424 650 ntBASIC5.03□□□□□ -1.6
PTPN6P29350 AL512624.1-201ENST00000613638 469 ntBASIC5.03□□□□□ -1.6
PTPN6P29350 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PTPN6P29350 AL590410.1-201ENST00000617925 333 ntBASIC5.03□□□□□ -1.6
PTPN6P29350 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.03□□□□□ -1.6
PTPN6P29350 AC138965.3-201ENST00000623875 498 ntBASIC5.03□□□□□ -1.6
PTPN6P29350 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.03□□□□□ -1.6
PTPN6P29350 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
PTPN6P29350 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PTPN6P29350 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PTPN6P29350 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PTPN6P29350 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PTPN6P29350 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PTPN6P29350 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PTPN6P29350 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.03□□□□□ -1.6
PTPN6P29350 HSPA8P17-201ENST00000427029 1382 ntBASIC5.03□□□□□ -1.6
PTPN6P29350 AC006210.2-201ENST00000367074 1545 ntBASIC5.02□□□□□ -1.61
PTPN6P29350 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PTPN6P29350 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PTPN6P29350 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
PTPN6P29350 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PTPN6P29350 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.02□□□□□ -1.61
PTPN6P29350 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.02□□□□□ -1.61
PTPN6P29350 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PTPN6P29350 AC005294.1-201ENST00000355509 281 ntBASIC5.02□□□□□ -1.61
PTPN6P29350 RN7SKP162-201ENST00000363605 345 ntBASIC5.02□□□□□ -1.61
PTPN6P29350 RNU4-7P-201ENST00000364758 141 ntBASIC5.02□□□□□ -1.61
PTPN6P29350 MIR589-201ENST00000385238 99 ntBASIC5.02□□□□□ -1.61
PTPN6P29350 NPM1P4-201ENST00000414095 812 ntBASIC5.02□□□□□ -1.61
PTPN6P29350 GTF3AP1-201ENST00000416942 1004 ntBASIC5.02□□□□□ -1.61
PTPN6P29350 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PTPN6P29350 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.02□□□□□ -1.61
PTPN6P29350 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.02□□□□□ -1.61
PTPN6P29350 RFESDP1-201ENST00000422350 461 ntBASIC5.02□□□□□ -1.61
PTPN6P29350 AC093084.1-201ENST00000424233 687 ntBASIC5.02□□□□□ -1.61
PTPN6P29350 AC090018.1-201ENST00000434369 367 ntBASIC5.02□□□□□ -1.61
PTPN6P29350 AL392003.1-201ENST00000434394 243 ntBASIC5.02□□□□□ -1.61
PTPN6P29350 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.02□□□□□ -1.61
PTPN6P29350 TCEA1P3-201ENST00000443005 880 ntBASIC5.02□□□□□ -1.61
PTPN6P29350 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.02□□□□□ -1.61
PTPN6P29350 AL356390.1-201ENST00000455684 397 ntBASIC5.02□□□□□ -1.61
PTPN6P29350 AC245028.2-201ENST00000458673 253 ntBASIC5.02□□□□□ -1.61
PTPN6P29350 AC108161.1-201ENST00000461060 402 ntBASIC5.02□□□□□ -1.61
PTPN6P29350 AL133445.1-201ENST00000467051 452 ntBASIC5.02□□□□□ -1.61
PTPN6P29350 RPS26P39-201ENST00000469206 341 ntBASIC5.02□□□□□ -1.61
PTPN6P29350 AC022336.1-201ENST00000475510 337 ntBASIC5.02□□□□□ -1.61
PTPN6P29350 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.02□□□□□ -1.61
PTPN6P29350 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.02□□□□□ -1.61
PTPN6P29350 BX510359.5-201ENST00000515651 304 ntBASIC5.02□□□□□ -1.61
PTPN6P29350 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PTPN6P29350 RN7SKP99-201ENST00000517028 307 ntBASIC5.02□□□□□ -1.61
PTPN6P29350 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.02□□□□□ -1.61
PTPN6P29350 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.02□□□□□ -1.61
PTPN6P29350 AC022784.5-201ENST00000522241 437 ntBASIC5.02□□□□□ -1.61
PTPN6P29350 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PTPN6P29350 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.02□□□□□ -1.61
PTPN6P29350 MIR4489-201ENST00000578869 62 ntBASIC5.02□□□□□ -1.61
PTPN6P29350 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.02□□□□□ -1.61
PTPN6P29350 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.02□□□□□ -1.61
PTPN6P29350 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.02□□□□□ -1.61
PTPN6P29350 AC015922.4-201ENST00000612568 690 ntBASIC5.02□□□□□ -1.61
PTPN6P29350 AL359513.1-201ENST00000614364 557 ntBASIC5.02□□□□□ -1.61
PTPN6P29350 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PTPN6P29350 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PTPN6P29350 AP003499.2-201ENST00000624100 483 ntBASIC5.02□□□□□ -1.61
PTPN6P29350 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.02□□□□□ -1.61
PTPN6P29350 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PTPN6P29350 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PTPN6P29350 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PTPN6P29350 TCP11X1-202ENST00000622971 1372 ntBASIC5.02□□□□□ -1.61
PTPN6P29350 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PTPN6P29350 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PTPN6P29350 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.02□□□□□ -1.61
PTPN6P29350 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
PTPN6P29350 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
PTPN6P29350 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.01□□□□□ -1.61
PTPN6P29350 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PTPN6P29350 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PTPN6P29350 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
PTPN6P29350 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms