Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CTPS1P17812 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.48□□□□□ -1.53
CTPS1P17812 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CTPS1P17812 RBM22P1-201ENST00000578589 1214 ntBASIC5.48□□□□□ -1.53
CTPS1P17812 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.48□□□□□ -1.53
CTPS1P17812 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CTPS1P17812 AC133794.1-201ENST00000602731 914 ntBASIC5.48□□□□□ -1.53
CTPS1P17812 AP004372.1-201ENST00000604842 844 ntBASIC5.48□□□□□ -1.53
CTPS1P17812 AC015849.2-201ENST00000605738 409 ntBASIC5.48□□□□□ -1.53
CTPS1P17812 MIR6768-201ENST00000610734 72 ntBASIC5.48□□□□□ -1.53
CTPS1P17812 AC073869.8-201ENST00000641806 335 ntBASIC5.48□□□□□ -1.53
CTPS1P17812 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CTPS1P17812 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CTPS1P17812 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
CTPS1P17812 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CTPS1P17812 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CTPS1P17812 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CTPS1P17812 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CTPS1P17812 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CTPS1P17812 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CTPS1P17812 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CTPS1P17812 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
CTPS1P17812 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CTPS1P17812 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.47□□□□□ -1.53
CTPS1P17812 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.47□□□□□ -1.53
CTPS1P17812 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CTPS1P17812 AC109446.4-201ENST00000623235 2755 ntBASIC5.47□□□□□ -1.53
CTPS1P17812 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CTPS1P17812 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.47□□□□□ -1.53
CTPS1P17812 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.47□□□□□ -1.53
CTPS1P17812 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CTPS1P17812 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CTPS1P17812 OR4K17-201ENST00000315543 1032 ntBASIC5.47□□□□□ -1.53
CTPS1P17812 MIR133B-201ENST00000362210 119 ntBASIC5.47□□□□□ -1.53
CTPS1P17812 MIR143-201ENST00000385300 106 ntBASIC5.47□□□□□ -1.53
CTPS1P17812 RNA5SP105-201ENST00000391123 113 ntBASIC5.47□□□□□ -1.53
CTPS1P17812 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CTPS1P17812 RSL24D1P1-201ENST00000404972 493 ntBASIC5.47□□□□□ -1.53
CTPS1P17812 OR4K12P-201ENST00000406538 961 ntBASIC5.47□□□□□ -1.53
CTPS1P17812 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.47□□□□□ -1.53
CTPS1P17812 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CTPS1P17812 SRSF1P1-201ENST00000424058 520 ntBASIC5.47□□□□□ -1.53
CTPS1P17812 MTCO2P1-201ENST00000424648 477 ntBASIC5.47□□□□□ -1.53
CTPS1P17812 VTI1BP4-201ENST00000427516 527 ntBASIC5.47□□□□□ -1.53
CTPS1P17812 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.47□□□□□ -1.53
CTPS1P17812 PTP4A1P3-201ENST00000433661 420 ntBASIC5.47□□□□□ -1.53
CTPS1P17812 AC046176.1-201ENST00000435260 1170 ntBASIC5.47□□□□□ -1.53
CTPS1P17812 CYCSP12-201ENST00000437729 300 ntBASIC5.47□□□□□ -1.53
CTPS1P17812 AC073465.2-201ENST00000440938 498 ntBASIC5.47□□□□□ -1.53
CTPS1P17812 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.47□□□□□ -1.53
CTPS1P17812 AL627224.1-201ENST00000448334 444 ntBASIC5.47□□□□□ -1.53
CTPS1P17812 AL133445.1-201ENST00000467051 452 ntBASIC5.47□□□□□ -1.53
CTPS1P17812 AC018635.1-201ENST00000468292 1030 ntBASIC5.47□□□□□ -1.53
CTPS1P17812 OR11I1P-201ENST00000486033 954 ntBASIC5.47□□□□□ -1.53
CTPS1P17812 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CTPS1P17812 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.47□□□□□ -1.53
CTPS1P17812 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.47□□□□□ -1.53
CTPS1P17812 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.47□□□□□ -1.53
CTPS1P17812 AP004607.2-201ENST00000533949 322 ntBASIC5.47□□□□□ -1.53
CTPS1P17812 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.47□□□□□ -1.53
CTPS1P17812 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CTPS1P17812 BLZF2P-201ENST00000553776 1130 ntBASIC5.47□□□□□ -1.53
CTPS1P17812 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.47□□□□□ -1.53
CTPS1P17812 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.47□□□□□ -1.53
CTPS1P17812 RN7SL753P-201ENST00000581238 290 ntBASIC5.47□□□□□ -1.53
CTPS1P17812 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.47□□□□□ -1.53
CTPS1P17812 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC5.47□□□□□ -1.53
CTPS1P17812 AP000864.1-201ENST00000609424 650 ntBASIC5.47□□□□□ -1.53
CTPS1P17812 AC104763.3-201ENST00000613765 618 ntBASIC5.47□□□□□ -1.53
CTPS1P17812 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.47□□□□□ -1.53
CTPS1P17812 AC018926.1-201ENST00000616335 435 ntBASIC5.47□□□□□ -1.53
CTPS1P17812 MIR1264-201ENST00000616374 69 ntBASIC5.47□□□□□ -1.53
CTPS1P17812 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.47□□□□□ -1.53
CTPS1P17812 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CTPS1P17812 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.47□□□□□ -1.53
CTPS1P17812 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.47□□□□□ -1.53
CTPS1P17812 AC016745.2-201ENST00000608834 3443 ntBASIC5.47□□□□□ -1.53
CTPS1P17812 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CTPS1P17812 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.47□□□□□ -1.53
CTPS1P17812 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.47□□□□□ -1.53
CTPS1P17812 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CTPS1P17812 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CTPS1P17812 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.47□□□□□ -1.53
CTPS1P17812 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.47□□□□□ -1.53
CTPS1P17812 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CTPS1P17812 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CTPS1P17812 AC007938.2-201ENST00000604666 2634 ntBASIC5.46□□□□□ -1.53
CTPS1P17812 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CTPS1P17812 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
CTPS1P17812 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CTPS1P17812 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
CTPS1P17812 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CTPS1P17812 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
CTPS1P17812 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CTPS1P17812 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CTPS1P17812 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.46□□□□□ -1.54
CTPS1P17812 AC092681.1-201ENST00000297369 291 ntBASIC5.46□□□□□ -1.54
CTPS1P17812 RN7SKP162-201ENST00000363605 345 ntBASIC5.46□□□□□ -1.54
CTPS1P17812 RNA5SP335-201ENST00000363817 110 ntBASIC5.46□□□□□ -1.54
CTPS1P17812 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms