Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
PDGFRAP16234 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PDGFRAP16234 RN7SKP278-201ENST00000410504 342 ntBASIC5.53□□□□□ -1.52
PDGFRAP16234 SLC35E1P1-201ENST00000419313 864 ntBASIC5.53□□□□□ -1.52
PDGFRAP16234 MTCO1P45-201ENST00000431457 267 ntBASIC5.53□□□□□ -1.52
PDGFRAP16234 MTCO1P57-201ENST00000432182 261 ntBASIC5.53□□□□□ -1.52
PDGFRAP16234 TXNP2-201ENST00000443918 295 ntBASIC5.53□□□□□ -1.52
PDGFRAP16234 AL163193.1-201ENST00000444895 788 ntBASIC5.53□□□□□ -1.52
PDGFRAP16234 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.53□□□□□ -1.52
PDGFRAP16234 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.53□□□□□ -1.52
PDGFRAP16234 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.53□□□□□ -1.52
PDGFRAP16234 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.53□□□□□ -1.52
PDGFRAP16234 STRADBP1-201ENST00000478954 1281 ntBASIC5.53□□□□□ -1.52
PDGFRAP16234 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
PDGFRAP16234 RN7SL30P-201ENST00000488416 306 ntBASIC5.53□□□□□ -1.52
PDGFRAP16234 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.53□□□□□ -1.52
PDGFRAP16234 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.53□□□□□ -1.52
PDGFRAP16234 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.53□□□□□ -1.52
PDGFRAP16234 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.53□□□□□ -1.52
PDGFRAP16234 HIGD1AP14-201ENST00000507617 282 ntBASIC5.53□□□□□ -1.52
PDGFRAP16234 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.53□□□□□ -1.52
PDGFRAP16234 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.53□□□□□ -1.52
PDGFRAP16234 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.53□□□□□ -1.52
PDGFRAP16234 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.53□□□□□ -1.52
PDGFRAP16234 AC008147.3-201ENST00000548666 354 ntBASIC5.53□□□□□ -1.52
PDGFRAP16234 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.53□□□□□ -1.52
PDGFRAP16234 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.53□□□□□ -1.52
PDGFRAP16234 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.53□□□□□ -1.52
PDGFRAP16234 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PDGFRAP16234 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.53□□□□□ -1.52
PDGFRAP16234 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.53□□□□□ -1.52
PDGFRAP16234 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.53□□□□□ -1.52
PDGFRAP16234 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDGFRAP16234 SDR42E1P1-201ENST00000611327 477 ntBASIC5.53□□□□□ -1.52
PDGFRAP16234 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.53□□□□□ -1.52
PDGFRAP16234 AC026367.3-201ENST00000619032 590 ntBASIC5.53□□□□□ -1.52
PDGFRAP16234 AC015722.2-201ENST00000622210 551 ntBASIC5.53□□□□□ -1.52
PDGFRAP16234 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.53□□□□□ -1.52
PDGFRAP16234 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDGFRAP16234 SOCS5P3-201ENST00000425115 1576 ntBASIC5.53□□□□□ -1.52
PDGFRAP16234 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PDGFRAP16234 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
PDGFRAP16234 AC093775.1-201ENST00000624154 1868 ntBASIC5.53□□□□□ -1.52
PDGFRAP16234 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PDGFRAP16234 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
PDGFRAP16234 AC112198.2-201ENST00000426589 6996 ntBASIC5.53□□□□□ -1.52
PDGFRAP16234 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PDGFRAP16234 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDGFRAP16234 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDGFRAP16234 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PDGFRAP16234 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.52□□□□□ -1.53
PDGFRAP16234 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.52□□□□□ -1.53
PDGFRAP16234 AC023421.1-201ENST00000590535 1785 ntBASIC5.52□□□□□ -1.53
PDGFRAP16234 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDGFRAP16234 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.52□□□□□ -1.53
PDGFRAP16234 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDGFRAP16234 AL034549.2-201ENST00000618285 3373 ntBASIC5.52□□□□□ -1.53
PDGFRAP16234 C4BPAP1-201ENST00000415474 1893 ntBASIC5.52□□□□□ -1.53
PDGFRAP16234 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDGFRAP16234 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
PDGFRAP16234 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDGFRAP16234 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDGFRAP16234 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PDGFRAP16234 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.52□□□□□ -1.53
PDGFRAP16234 AC005294.1-201ENST00000355509 281 ntBASIC5.52□□□□□ -1.53
PDGFRAP16234 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.52□□□□□ -1.53
PDGFRAP16234 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
PDGFRAP16234 SNORA5.1-201ENST00000384275 131 ntBASIC5.52□□□□□ -1.53
PDGFRAP16234 RNU6-1320P-201ENST00000390838 107 ntBASIC5.52□□□□□ -1.53
PDGFRAP16234 RNU6-1269P-201ENST00000391139 107 ntBASIC5.52□□□□□ -1.53
PDGFRAP16234 NPM1P10-201ENST00000398310 865 ntBASIC5.52□□□□□ -1.53
PDGFRAP16234 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.52□□□□□ -1.53
PDGFRAP16234 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.52□□□□□ -1.53
PDGFRAP16234 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.52□□□□□ -1.53
PDGFRAP16234 NANOGP4-201ENST00000427230 913 ntBASIC5.52□□□□□ -1.53
PDGFRAP16234 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.52□□□□□ -1.53
PDGFRAP16234 CLUHP1-201ENST00000435012 1190 ntBASIC5.52□□□□□ -1.53
PDGFRAP16234 CCRL1P1-201ENST00000449542 1053 ntBASIC5.52□□□□□ -1.53
PDGFRAP16234 RNU6-599P-201ENST00000459383 107 ntBASIC5.52□□□□□ -1.53
PDGFRAP16234 RNU6-1193P-201ENST00000459461 107 ntBASIC5.52□□□□□ -1.53
PDGFRAP16234 RN7SL799P-201ENST00000475891 298 ntBASIC5.52□□□□□ -1.53
PDGFRAP16234 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDGFRAP16234 AC098976.1-201ENST00000513014 541 ntBASIC5.52□□□□□ -1.53
PDGFRAP16234 RPS27AP18-201ENST00000515536 459 ntBASIC5.52□□□□□ -1.53
PDGFRAP16234 AL671862.1-201ENST00000515851 349 ntBASIC5.52□□□□□ -1.53
PDGFRAP16234 RNA5SP92-201ENST00000516437 110 ntBASIC5.52□□□□□ -1.53
PDGFRAP16234 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.52□□□□□ -1.53
PDGFRAP16234 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.52□□□□□ -1.53
PDGFRAP16234 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.52□□□□□ -1.53
PDGFRAP16234 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.52□□□□□ -1.53
PDGFRAP16234 AC027216.1-201ENST00000577726 685 ntBASIC5.52□□□□□ -1.53
PDGFRAP16234 MIR4675-201ENST00000577898 77 ntBASIC5.52□□□□□ -1.53
PDGFRAP16234 SNORD39.2-201ENST00000579995 76 ntBASIC5.52□□□□□ -1.53
PDGFRAP16234 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
PDGFRAP16234 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.52□□□□□ -1.53
PDGFRAP16234 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.52□□□□□ -1.53
PDGFRAP16234 AC011626.1-201ENST00000604710 562 ntBASIC5.52□□□□□ -1.53
PDGFRAP16234 AL022394.1-201ENST00000606979 292 ntBASIC5.52□□□□□ -1.53
PDGFRAP16234 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.52□□□□□ -1.53
PDGFRAP16234 MIR6839-201ENST00000620425 113 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms