Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 RN7SL356P-201ENST00000582228 248 ntBASIC6.37□□□□□ -1.39
HLA-DOAP06340 AP000769.2-201ENST00000602344 396 ntBASIC6.37□□□□□ -1.39
HLA-DOAP06340 AC095055.1-201ENST00000603472 1113 ntBASIC6.37□□□□□ -1.39
HLA-DOAP06340 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC6.37□□□□□ -1.39
HLA-DOAP06340 AC100847.1-201ENST00000611316 481 ntBASIC6.37□□□□□ -1.39
HLA-DOAP06340 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.37□□□□□ -1.39
HLA-DOAP06340 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
HLA-DOAP06340 AC018926.1-201ENST00000616335 435 ntBASIC6.37□□□□□ -1.39
HLA-DOAP06340 AC126544.2-201ENST00000625174 749 ntBASIC6.37□□□□□ -1.39
HLA-DOAP06340 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
HLA-DOAP06340 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
HLA-DOAP06340 AC073869.8-201ENST00000641806 335 ntBASIC6.37□□□□□ -1.39
HLA-DOAP06340 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
HLA-DOAP06340 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DOAP06340 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DOAP06340 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DOAP06340 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DOAP06340 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DOAP06340 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.37□□□□□ -1.39
HLA-DOAP06340 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DOAP06340 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
HLA-DOAP06340 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.36□□□□□ -1.39
HLA-DOAP06340 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-DOAP06340 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.36□□□□□ -1.39
HLA-DOAP06340 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-DOAP06340 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
HLA-DOAP06340 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
HLA-DOAP06340 AP004289.1-201ENST00000436307 2205 ntBASIC6.36□□□□□ -1.39
HLA-DOAP06340 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-DOAP06340 RNU6-609P-201ENST00000365459 107 ntBASIC6.36□□□□□ -1.39
HLA-DOAP06340 RNU1-106P-201ENST00000384382 164 ntBASIC6.36□□□□□ -1.39
HLA-DOAP06340 U3.36-201ENST00000408418 213 ntBASIC6.36□□□□□ -1.39
HLA-DOAP06340 AL024507.1-201ENST00000412741 274 ntBASIC6.36□□□□□ -1.39
HLA-DOAP06340 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.36□□□□□ -1.39
HLA-DOAP06340 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC6.36□□□□□ -1.39
HLA-DOAP06340 ARAFP1-201ENST00000422172 605 ntBASIC6.36□□□□□ -1.39
HLA-DOAP06340 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC6.36□□□□□ -1.39
HLA-DOAP06340 CLUHP1-201ENST00000435012 1190 ntBASIC6.36□□□□□ -1.39
HLA-DOAP06340 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC6.36□□□□□ -1.39
HLA-DOAP06340 TXNP2-201ENST00000443918 295 ntBASIC6.36□□□□□ -1.39
HLA-DOAP06340 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC6.36□□□□□ -1.39
HLA-DOAP06340 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.36□□□□□ -1.39
HLA-DOAP06340 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC6.36□□□□□ -1.39
HLA-DOAP06340 AC109462.1-201ENST00000491087 368 ntBASIC6.36□□□□□ -1.39
HLA-DOAP06340 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.36□□□□□ -1.39
HLA-DOAP06340 AC093720.1-201ENST00000505681 714 ntBASIC6.36□□□□□ -1.39
HLA-DOAP06340 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.36□□□□□ -1.39
HLA-DOAP06340 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.36□□□□□ -1.39
HLA-DOAP06340 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.36□□□□□ -1.39
HLA-DOAP06340 AC005351.1-201ENST00000511152 786 ntBASIC6.36□□□□□ -1.39
HLA-DOAP06340 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC6.36□□□□□ -1.39
HLA-DOAP06340 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC6.36□□□□□ -1.39
HLA-DOAP06340 AC024940.3-201ENST00000538551 316 ntBASIC6.36□□□□□ -1.39
HLA-DOAP06340 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC6.36□□□□□ -1.39
HLA-DOAP06340 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC6.36□□□□□ -1.39
HLA-DOAP06340 AC127381.1-201ENST00000555979 939 ntBASIC6.36□□□□□ -1.39
HLA-DOAP06340 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.36□□□□□ -1.39
HLA-DOAP06340 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC6.36□□□□□ -1.39
HLA-DOAP06340 AC006116.3-201ENST00000592968 361 ntBASIC6.36□□□□□ -1.39
HLA-DOAP06340 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.36□□□□□ -1.39
HLA-DOAP06340 AC025165.5-201ENST00000602802 578 ntBASIC6.36□□□□□ -1.39
HLA-DOAP06340 AC087763.1-201ENST00000603391 286 ntBASIC6.36□□□□□ -1.39
HLA-DOAP06340 AC069431.2-201ENST00000604149 1099 ntBASIC6.36□□□□□ -1.39
HLA-DOAP06340 AC068880.4-201ENST00000623082 495 ntBASIC6.36□□□□□ -1.39
HLA-DOAP06340 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.36□□□□□ -1.39
HLA-DOAP06340 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-DOAP06340 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
HLA-DOAP06340 AL353796.1-201ENST00000561542 3241 ntBASIC6.36□□□□□ -1.39
HLA-DOAP06340 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.36□□□□□ -1.39
HLA-DOAP06340 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
HLA-DOAP06340 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HLA-DOAP06340 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
HLA-DOAP06340 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HLA-DOAP06340 AC114947.2-201ENST00000565748 2125 ntBASIC6.35□□□□□ -1.39
HLA-DOAP06340 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.35□□□□□ -1.39
HLA-DOAP06340 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HLA-DOAP06340 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.35□□□□□ -1.39
HLA-DOAP06340 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.35□□□□□ -1.39
HLA-DOAP06340 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HLA-DOAP06340 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
HLA-DOAP06340 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HLA-DOAP06340 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC6.35□□□□□ -1.39
HLA-DOAP06340 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HLA-DOAP06340 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.35□□□□□ -1.39
HLA-DOAP06340 RNU6-650P-201ENST00000365658 111 ntBASIC6.35□□□□□ -1.39
HLA-DOAP06340 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC6.35□□□□□ -1.39
HLA-DOAP06340 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.35□□□□□ -1.39
HLA-DOAP06340 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.35□□□□□ -1.39
HLA-DOAP06340 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.35□□□□□ -1.39
HLA-DOAP06340 MTND4LP13-201ENST00000425022 298 ntBASIC6.35□□□□□ -1.39
HLA-DOAP06340 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC6.35□□□□□ -1.39
HLA-DOAP06340 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.35□□□□□ -1.39
HLA-DOAP06340 MTCO2P20-201ENST00000437339 673 ntBASIC6.35□□□□□ -1.39
HLA-DOAP06340 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.35□□□□□ -1.39
HLA-DOAP06340 AC069277.2-201ENST00000454211 432 ntBASIC6.35□□□□□ -1.39
HLA-DOAP06340 RN7SL423P-201ENST00000486202 304 ntBASIC6.35□□□□□ -1.39
HLA-DOAP06340 AC010627.1-201ENST00000503819 1294 ntBASIC6.35□□□□□ -1.39
HLA-DOAP06340 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC6.35□□□□□ -1.39
HLA-DOAP06340 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.35□□□□□ -1.39
HLA-DOAP06340 AC112673.1-201ENST00000513168 575 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms