Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AP000473.2-201ENST00000602659 1537 ntBASIC5.62□□□□□ -1.51
CHRNA1P02708 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CHRNA1P02708 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CHRNA1P02708 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.62□□□□□ -1.51
CHRNA1P02708 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.62□□□□□ -1.51
CHRNA1P02708 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CHRNA1P02708 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.62□□□□□ -1.51
CHRNA1P02708 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CHRNA1P02708 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CHRNA1P02708 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CHRNA1P02708 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNA1P02708 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNA1P02708 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CHRNA1P02708 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.61□□□□□ -1.51
CHRNA1P02708 RN7SKP185-201ENST00000362813 326 ntBASIC5.61□□□□□ -1.51
CHRNA1P02708 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNA1P02708 AL133482.1-201ENST00000415988 498 ntBASIC5.61□□□□□ -1.51
CHRNA1P02708 AL590139.1-201ENST00000416267 400 ntBASIC5.61□□□□□ -1.51
CHRNA1P02708 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.61□□□□□ -1.51
CHRNA1P02708 BX323845.1-201ENST00000432417 179 ntBASIC5.61□□□□□ -1.51
CHRNA1P02708 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNA1P02708 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNA1P02708 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.61□□□□□ -1.51
CHRNA1P02708 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.61□□□□□ -1.51
CHRNA1P02708 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.61□□□□□ -1.51
CHRNA1P02708 RN7SL738P-201ENST00000470264 297 ntBASIC5.61□□□□□ -1.51
CHRNA1P02708 AC006463.2-201ENST00000473326 348 ntBASIC5.61□□□□□ -1.51
CHRNA1P02708 AC008897.1-201ENST00000494006 347 ntBASIC5.61□□□□□ -1.51
CHRNA1P02708 OR51K1P-201ENST00000510214 950 ntBASIC5.61□□□□□ -1.51
CHRNA1P02708 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.61□□□□□ -1.51
CHRNA1P02708 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNA1P02708 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.61□□□□□ -1.51
CHRNA1P02708 BGLT3-201ENST00000564523 994 ntBASIC5.61□□□□□ -1.51
CHRNA1P02708 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNA1P02708 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.61□□□□□ -1.51
CHRNA1P02708 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.61□□□□□ -1.51
CHRNA1P02708 MIR7703-201ENST00000620784 77 ntBASIC5.61□□□□□ -1.51
CHRNA1P02708 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.61□□□□□ -1.51
CHRNA1P02708 MFSD8-216ENST00000641147 4009 ntBASIC5.61□□□□□ -1.51
CHRNA1P02708 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNA1P02708 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.61□□□□□ -1.51
CHRNA1P02708 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CHRNA1P02708 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNA1P02708 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNA1P02708 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNA1P02708 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.6□□□□□ -1.51
CHRNA1P02708 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNA1P02708 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNA1P02708 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
CHRNA1P02708 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.6□□□□□ -1.51
CHRNA1P02708 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNA1P02708 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNA1P02708 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNA1P02708 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.6□□□□□ -1.51
CHRNA1P02708 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.6□□□□□ -1.51
CHRNA1P02708 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNA1P02708 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNA1P02708 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CHRNA1P02708 OR9G4-201ENST00000302957 984 ntBASIC5.6□□□□□ -1.51
CHRNA1P02708 RN7SKP153-201ENST00000365026 316 ntBASIC5.6□□□□□ -1.51
CHRNA1P02708 SNORA66-201ENST00000384792 133 ntBASIC5.6□□□□□ -1.51
CHRNA1P02708 MIR141-201ENST00000384975 95 ntBASIC5.6□□□□□ -1.51
CHRNA1P02708 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CHRNA1P02708 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.6□□□□□ -1.51
CHRNA1P02708 HSPD1P12-201ENST00000429127 1069 ntBASIC5.6□□□□□ -1.51
CHRNA1P02708 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.6□□□□□ -1.51
CHRNA1P02708 AC099670.2-201ENST00000435130 321 ntBASIC5.6□□□□□ -1.51
CHRNA1P02708 AL359265.1-201ENST00000440296 795 ntBASIC5.6□□□□□ -1.51
CHRNA1P02708 AC011753.3-201ENST00000443436 406 ntBASIC5.6□□□□□ -1.51
CHRNA1P02708 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.6□□□□□ -1.51
CHRNA1P02708 MTND6P5-201ENST00000448266 512 ntBASIC5.6□□□□□ -1.51
CHRNA1P02708 MORF4L1P4-201ENST00000450245 976 ntBASIC5.6□□□□□ -1.51
CHRNA1P02708 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.6□□□□□ -1.51
CHRNA1P02708 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNA1P02708 RN7SL205P-201ENST00000490174 284 ntBASIC5.6□□□□□ -1.51
CHRNA1P02708 AC022133.1-201ENST00000490961 571 ntBASIC5.6□□□□□ -1.51
CHRNA1P02708 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.6□□□□□ -1.51
CHRNA1P02708 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.6□□□□□ -1.51
CHRNA1P02708 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.6□□□□□ -1.51
CHRNA1P02708 RN7SL52P-201ENST00000584271 284 ntBASIC5.6□□□□□ -1.51
CHRNA1P02708 AL133406.3-201ENST00000606817 541 ntBASIC5.6□□□□□ -1.51
CHRNA1P02708 AL022394.1-201ENST00000606979 292 ntBASIC5.6□□□□□ -1.51
CHRNA1P02708 RN7SL722P-201ENST00000617780 284 ntBASIC5.6□□□□□ -1.51
CHRNA1P02708 RN7SL565P-201ENST00000618246 284 ntBASIC5.6□□□□□ -1.51
CHRNA1P02708 AC005618.4-201ENST00000625053 554 ntBASIC5.6□□□□□ -1.51
CHRNA1P02708 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNA1P02708 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CHRNA1P02708 AC004158.1-201ENST00000564508 4319 ntBASIC5.6□□□□□ -1.51
CHRNA1P02708 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNA1P02708 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNA1P02708 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNA1P02708 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA1P02708 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA1P02708 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.59□□□□□ -1.51
CHRNA1P02708 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA1P02708 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA1P02708 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.59□□□□□ -1.51
CHRNA1P02708 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA1P02708 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA1P02708 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms