Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 NPM1P35-201ENST00000533043 868 ntBASIC5.1□□□□□ -1.59
NKX2-2O95096 AP000916.1-201ENST00000533869 835 ntBASIC5.1□□□□□ -1.59
NKX2-2O95096 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
NKX2-2O95096 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.1□□□□□ -1.59
NKX2-2O95096 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.1□□□□□ -1.59
NKX2-2O95096 MIR4505-201ENST00000582238 73 ntBASIC5.1□□□□□ -1.59
NKX2-2O95096 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.1□□□□□ -1.59
NKX2-2O95096 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.1□□□□□ -1.59
NKX2-2O95096 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.1□□□□□ -1.59
NKX2-2O95096 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.1□□□□□ -1.59
NKX2-2O95096 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.1□□□□□ -1.59
NKX2-2O95096 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.1□□□□□ -1.59
NKX2-2O95096 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.1□□□□□ -1.59
NKX2-2O95096 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.1□□□□□ -1.59
NKX2-2O95096 AC079610.2-201ENST00000604818 690 ntBASIC5.1□□□□□ -1.59
NKX2-2O95096 AC097504.2-201ENST00000608088 454 ntBASIC5.1□□□□□ -1.59
NKX2-2O95096 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.1□□□□□ -1.59
NKX2-2O95096 uc_338.7-201ENST00000621834 124 ntBASIC5.1□□□□□ -1.59
NKX2-2O95096 AC145207.9-201ENST00000623802 325 ntBASIC5.1□□□□□ -1.59
NKX2-2O95096 AC024023.1-201ENST00000624530 922 ntBASIC5.1□□□□□ -1.59
NKX2-2O95096 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.1□□□□□ -1.59
NKX2-2O95096 MFSD8-213ENST00000641134 1327 ntBASIC5.1□□□□□ -1.59
NKX2-2O95096 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
NKX2-2O95096 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-2O95096 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
NKX2-2O95096 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-2O95096 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-2O95096 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.1□□□□□ -1.59
NKX2-2O95096 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-2O95096 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
NKX2-2O95096 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NKX2-2O95096 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.09□□□□□ -1.59
NKX2-2O95096 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NKX2-2O95096 AC020633.1-201ENST00000468439 2247 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
NKX2-2O95096 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.59
NKX2-2O95096 AL606537.1-201ENST00000607258 2011 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.09□□□□□ -1.59
NKX2-2O95096 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NKX2-2O95096 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
NKX2-2O95096 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.09□□□□□ -1.59
NKX2-2O95096 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NKX2-2O95096 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NKX2-2O95096 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NKX2-2O95096 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
NKX2-2O95096 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NKX2-2O95096 RN7SKP28-201ENST00000364770 305 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 RNU4-2-201ENST00000365668 141 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
NKX2-2O95096 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NKX2-2O95096 RNU6-1005P-201ENST00000384519 107 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 MIR320B1-201ENST00000390209 79 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
NKX2-2O95096 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NKX2-2O95096 STAT4-203ENST00000409995 709 ntTSL 5 BASIC5.09□□□□□ -1.59
NKX2-2O95096 UBE2V1P11-201ENST00000411559 285 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 OR6E1P-201ENST00000414424 923 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.09□□□□□ -1.59
NKX2-2O95096 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.09□□□□□ -1.59
NKX2-2O95096 DPY19L1P2-201ENST00000426647 915 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.09□□□□□ -1.59
NKX2-2O95096 RPS29P14-201ENST00000431518 171 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 RPL7P33-201ENST00000444159 742 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 RPL36AP39-201ENST00000445859 318 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 RPL31P15-201ENST00000449770 338 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 AL133244.1-201ENST00000456007 258 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 CBX1P5-201ENST00000475330 559 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.09□□□□□ -1.59
NKX2-2O95096 AC074087.1-201ENST00000512059 724 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 AC010374.2-201ENST00000512933 535 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.09□□□□□ -1.59
NKX2-2O95096 AC097486.1-201ENST00000515331 210 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.09□□□□□ -1.59
NKX2-2O95096 AP000859.1-201ENST00000525536 307 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.09□□□□□ -1.59
NKX2-2O95096 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.09□□□□□ -1.59
NKX2-2O95096 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.09□□□□□ -1.59
NKX2-2O95096 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.09□□□□□ -1.59
NKX2-2O95096 AL358913.1-201ENST00000554342 121 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
NKX2-2O95096 AGGF1P9-201ENST00000561884 913 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 AC106730.2-201ENST00000566641 540 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.09□□□□□ -1.59
NKX2-2O95096 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.09□□□□□ -1.59
NKX2-2O95096 SS18L2P2-201ENST00000583960 235 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 MIR7853-201ENST00000584820 132 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 AC068620.3-201ENST00000602749 560 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NKX2-2O95096 AC011374.2-201ENST00000607135 526 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 AC015982.1-201ENST00000608113 465 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 AF129408.1-201ENST00000608767 431 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 AL118522.2-201ENST00000616045 615 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 MIR6861-201ENST00000618657 64 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 AC127024.6-201ENST00000621598 424 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 AC010435.1-201ENST00000623353 1177 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 AC073869.8-201ENST00000641806 335 ntBASIC5.09□□□□□ -1.59
NKX2-2O95096 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.09□□□□□ -1.59
NKX2-2O95096 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.09□□□□□ -1.59
NKX2-2O95096 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms