Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PEX1O43933 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.71□□□□□ -1.5
PEX1O43933 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.71□□□□□ -1.5
PEX1O43933 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PEX1O43933 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PEX1O43933 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.71□□□□□ -1.5
PEX1O43933 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
PEX1O43933 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PEX1O43933 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
PEX1O43933 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
PEX1O43933 AL133243.2-201ENST00000610331 1621 ntBASIC5.7□□□□□ -1.5
PEX1O43933 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.7□□□□□ -1.5
PEX1O43933 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.7□□□□□ -1.5
PEX1O43933 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.7□□□□□ -1.5
PEX1O43933 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PEX1O43933 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PEX1O43933 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
PEX1O43933 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.7□□□□□ -1.5
PEX1O43933 AL137141.1-201ENST00000624622 4836 ntBASIC5.7□□□□□ -1.5
PEX1O43933 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PEX1O43933 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PEX1O43933 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PEX1O43933 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PEX1O43933 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
PEX1O43933 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
PEX1O43933 RAD1P1-201ENST00000231383 813 ntBASIC5.7□□□□□ -1.5
PEX1O43933 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PEX1O43933 RNU1-49P-201ENST00000363468 159 ntBASIC5.7□□□□□ -1.5
PEX1O43933 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.7□□□□□ -1.5
PEX1O43933 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PEX1O43933 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.7□□□□□ -1.5
PEX1O43933 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PEX1O43933 GPS2P1-201ENST00000411761 986 ntBASIC5.7□□□□□ -1.5
PEX1O43933 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.7□□□□□ -1.5
PEX1O43933 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.7□□□□□ -1.5
PEX1O43933 SLC20A1P1-201ENST00000413906 956 ntBASIC5.7□□□□□ -1.5
PEX1O43933 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.7□□□□□ -1.5
PEX1O43933 MTND2P18-201ENST00000419962 1030 ntBASIC5.7□□□□□ -1.5
PEX1O43933 GNG5P5-201ENST00000420444 220 ntBASIC5.7□□□□□ -1.5
PEX1O43933 VN1R110P-201ENST00000438988 971 ntBASIC5.7□□□□□ -1.5
PEX1O43933 DNAJA1P5-201ENST00000440278 943 ntBASIC5.7□□□□□ -1.5
PEX1O43933 BUD31P2-201ENST00000449374 300 ntBASIC5.7□□□□□ -1.5
PEX1O43933 GAPDHP14-201ENST00000450472 937 ntBASIC5.7□□□□□ -1.5
PEX1O43933 SEPT7P3-201ENST00000455017 621 ntBASIC5.7□□□□□ -1.5
PEX1O43933 RPL12P39-201ENST00000455456 496 ntBASIC5.7□□□□□ -1.5
PEX1O43933 AC023194.2-201ENST00000465398 406 ntBASIC5.7□□□□□ -1.5
PEX1O43933 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.7□□□□□ -1.5
PEX1O43933 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.7□□□□□ -1.5
PEX1O43933 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.7□□□□□ -1.5
PEX1O43933 AC021087.2-201ENST00000504656 1203 ntBASIC5.7□□□□□ -1.5
PEX1O43933 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.7□□□□□ -1.5
PEX1O43933 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.7□□□□□ -1.5
PEX1O43933 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.7□□□□□ -1.5
PEX1O43933 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.7□□□□□ -1.5
PEX1O43933 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.7□□□□□ -1.5
PEX1O43933 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.7□□□□□ -1.5
PEX1O43933 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.7□□□□□ -1.5
PEX1O43933 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.7□□□□□ -1.5
PEX1O43933 CYB5AP5-201ENST00000549779 389 ntBASIC5.7□□□□□ -1.5
PEX1O43933 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.7□□□□□ -1.5
PEX1O43933 AL512310.9-201ENST00000553311 948 ntBASIC5.7□□□□□ -1.5
PEX1O43933 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PEX1O43933 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PEX1O43933 CYCSP38-201ENST00000559840 322 ntBASIC5.7□□□□□ -1.5
PEX1O43933 AC007346.2-201ENST00000564816 892 ntBASIC5.7□□□□□ -1.5
PEX1O43933 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.7□□□□□ -1.5
PEX1O43933 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.7□□□□□ -1.5
PEX1O43933 AC073137.1-201ENST00000605636 634 ntBASIC5.7□□□□□ -1.5
PEX1O43933 AC015982.1-201ENST00000608113 465 ntBASIC5.7□□□□□ -1.5
PEX1O43933 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.7□□□□□ -1.5
PEX1O43933 VN1R9P-201ENST00000614184 867 ntBASIC5.7□□□□□ -1.5
PEX1O43933 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.7□□□□□ -1.5
PEX1O43933 AC105105.5-201ENST00000622635 1294 ntBASIC5.7□□□□□ -1.5
PEX1O43933 SNX18P12-201ENST00000624821 759 ntBASIC5.7□□□□□ -1.5
PEX1O43933 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.7□□□□□ -1.5
PEX1O43933 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
PEX1O43933 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
PEX1O43933 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
PEX1O43933 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PEX1O43933 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PEX1O43933 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.7□□□□□ -1.5
PEX1O43933 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
PEX1O43933 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
PEX1O43933 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PEX1O43933 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.7□□□□□ -1.5
PEX1O43933 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PEX1O43933 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.7□□□□□ -1.5
PEX1O43933 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PEX1O43933 AC130304.1-201ENST00000622942 2385 ntBASIC5.7□□□□□ -1.5
PEX1O43933 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PEX1O43933 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.69□□□□□ -1.5
PEX1O43933 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.69□□□□□ -1.5
PEX1O43933 AL022393.1-201ENST00000625142 1677 ntBASIC5.69□□□□□ -1.5
PEX1O43933 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.69□□□□□ -1.5
PEX1O43933 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.69□□□□□ -1.5
PEX1O43933 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
PEX1O43933 AL022311.1-201ENST00000623726 19416 ntBASIC5.69□□□□□ -1.5
PEX1O43933 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
PEX1O43933 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
PEX1O43933 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms