Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TO15178 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.1□□□□□ -1.59
TO15178 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
TO15178 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TO15178 RN7SKP185-201ENST00000362813 326 ntBASIC5.1□□□□□ -1.59
TO15178 RN7SKP124-201ENST00000364730 341 ntBASIC5.1□□□□□ -1.59
TO15178 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TO15178 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.1□□□□□ -1.59
TO15178 RNU1-74P-201ENST00000384108 171 ntBASIC5.1□□□□□ -1.59
TO15178 SNORA11.3-201ENST00000408471 128 ntBASIC5.1□□□□□ -1.59
TO15178 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TO15178 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.1□□□□□ -1.59
TO15178 SETP15-201ENST00000412724 337 ntBASIC5.1□□□□□ -1.59
TO15178 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.1□□□□□ -1.59
TO15178 TCP1P3-201ENST00000414406 1498 ntBASIC5.1□□□□□ -1.59
TO15178 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.1□□□□□ -1.59
TO15178 RPS26P13-201ENST00000419030 330 ntBASIC5.1□□□□□ -1.59
TO15178 AL136231.1-201ENST00000429407 730 ntBASIC5.1□□□□□ -1.59
TO15178 RPL7P56-201ENST00000429441 717 ntBASIC5.1□□□□□ -1.59
TO15178 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.1□□□□□ -1.59
TO15178 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.1□□□□□ -1.59
TO15178 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.1□□□□□ -1.59
TO15178 AC016724.1-201ENST00000453215 421 ntBASIC5.1□□□□□ -1.59
TO15178 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.1□□□□□ -1.59
TO15178 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TO15178 RN7SL717P-201ENST00000478343 297 ntBASIC5.1□□□□□ -1.59
TO15178 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TO15178 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.1□□□□□ -1.59
TO15178 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TO15178 AC114774.1-201ENST00000507410 1770 ntBASIC5.1□□□□□ -1.59
TO15178 AC021106.1-201ENST00000509020 1058 ntBASIC5.1□□□□□ -1.59
TO15178 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.1□□□□□ -1.59
TO15178 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.1□□□□□ -1.59
TO15178 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TO15178 AC112206.4-201ENST00000515142 405 ntBASIC5.1□□□□□ -1.59
TO15178 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.1□□□□□ -1.59
TO15178 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.1□□□□□ -1.59
TO15178 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.1□□□□□ -1.59
TO15178 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.1□□□□□ -1.59
TO15178 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.1□□□□□ -1.59
TO15178 AC092451.2-201ENST00000538746 658 ntBASIC5.1□□□□□ -1.59
TO15178 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.1□□□□□ -1.59
TO15178 AL359219.2-201ENST00000555184 348 ntBASIC5.1□□□□□ -1.59
TO15178 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.1□□□□□ -1.59
TO15178 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC5.1□□□□□ -1.59
TO15178 AC068870.1-201ENST00000563737 2455 ntBASIC5.1□□□□□ -1.59
TO15178 MIR4660-201ENST00000583549 74 ntBASIC5.1□□□□□ -1.59
TO15178 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.1□□□□□ -1.59
TO15178 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
TO15178 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.1□□□□□ -1.59
TO15178 AC004775.1-201ENST00000607389 753 ntBASIC5.1□□□□□ -1.59
TO15178 AL118522.2-201ENST00000616045 615 ntBASIC5.1□□□□□ -1.59
TO15178 SNORA11.6-201ENST00000619030 128 ntBASIC5.1□□□□□ -1.59
TO15178 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.1□□□□□ -1.59
TO15178 AC132068.1-201ENST00000623805 459 ntBASIC5.1□□□□□ -1.59
TO15178 AC002525.1-201ENST00000624392 1622 ntBASIC5.1□□□□□ -1.59
TO15178 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.1□□□□□ -1.59
TO15178 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.1□□□□□ -1.59
TO15178 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.1□□□□□ -1.59
TO15178 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TO15178 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TO15178 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
TO15178 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
TO15178 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TO15178 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.09□□□□□ -1.59
TO15178 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
TO15178 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TO15178 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
TO15178 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TO15178 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.09□□□□□ -1.59
TO15178 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.09□□□□□ -1.59
TO15178 AC092681.1-201ENST00000297369 291 ntBASIC5.09□□□□□ -1.59
TO15178 RNA5SP435-201ENST00000364044 108 ntBASIC5.09□□□□□ -1.59
TO15178 RNU4-7P-201ENST00000364758 141 ntBASIC5.09□□□□□ -1.59
TO15178 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TO15178 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.09□□□□□ -1.59
TO15178 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TO15178 AL034403.1-201ENST00000399414 885 ntBASIC5.09□□□□□ -1.59
TO15178 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
TO15178 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.09□□□□□ -1.59
TO15178 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TO15178 AP000936.3-201ENST00000438127 255 ntBASIC5.09□□□□□ -1.59
TO15178 SDR42E1P3-201ENST00000438345 502 ntBASIC5.09□□□□□ -1.59
TO15178 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC5.09□□□□□ -1.59
TO15178 RPL10P17-201ENST00000453852 316 ntBASIC5.09□□□□□ -1.59
TO15178 AC108729.2-201ENST00000476543 840 ntBASIC5.09□□□□□ -1.59
TO15178 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TO15178 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.09□□□□□ -1.59
TO15178 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.09□□□□□ -1.59
TO15178 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TO15178 AC111000.6-201ENST00000514471 709 ntBASIC5.09□□□□□ -1.59
TO15178 RNU6-513P-201ENST00000516104 104 ntBASIC5.09□□□□□ -1.59
TO15178 snoU109.6-201ENST00000516831 118 ntBASIC5.09□□□□□ -1.59
TO15178 SNORA76.2-201ENST00000517095 137 ntBASIC5.09□□□□□ -1.59
TO15178 IGLVIV-64-201ENST00000518581 301 ntBASIC5.09□□□□□ -1.59
TO15178 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.09□□□□□ -1.59
TO15178 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.09□□□□□ -1.59
TO15178 DPRXP4-201ENST00000578053 568 ntBASIC5.09□□□□□ -1.59
TO15178 AP005262.1-201ENST00000582646 997 ntBASIC5.09□□□□□ -1.59
TO15178 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms