Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.24□□□□□ -1.73
SDCBPO00560 NPM1P4-201ENST00000414095 812 ntBASIC4.24□□□□□ -1.73
SDCBPO00560 AC108075.1-201ENST00000424692 529 ntBASIC4.24□□□□□ -1.73
SDCBPO00560 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.24□□□□□ -1.73
SDCBPO00560 RPS4XP16-201ENST00000427198 791 ntBASIC4.24□□□□□ -1.73
SDCBPO00560 CFL1P1-202ENST00000432948 411 ntBASIC4.24□□□□□ -1.73
SDCBPO00560 AL391987.1-201ENST00000441025 200 ntBASIC4.24□□□□□ -1.73
SDCBPO00560 TXNP5-201ENST00000441043 315 ntBASIC4.24□□□□□ -1.73
SDCBPO00560 AL031584.1-201ENST00000447169 754 ntBASIC4.24□□□□□ -1.73
SDCBPO00560 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SDCBPO00560 RN7SL443P-201ENST00000464331 290 ntBASIC4.24□□□□□ -1.73
SDCBPO00560 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4.24□□□□□ -1.73
SDCBPO00560 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
SDCBPO00560 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.24□□□□□ -1.73
SDCBPO00560 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SDCBPO00560 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SDCBPO00560 CYCSP40-201ENST00000575927 294 ntBASIC4.24□□□□□ -1.73
SDCBPO00560 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.24□□□□□ -1.73
SDCBPO00560 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.24□□□□□ -1.73
SDCBPO00560 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.24□□□□□ -1.73
SDCBPO00560 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.24□□□□□ -1.73
SDCBPO00560 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.24□□□□□ -1.73
SDCBPO00560 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.24□□□□□ -1.73
SDCBPO00560 AP005131.7-201ENST00000610087 611 ntBASIC4.24□□□□□ -1.73
SDCBPO00560 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.24□□□□□ -1.73
SDCBPO00560 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.24□□□□□ -1.73
SDCBPO00560 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.24□□□□□ -1.73
SDCBPO00560 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SDCBPO00560 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
SDCBPO00560 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SDCBPO00560 AC068446.1-201ENST00000556425 1549 ntBASIC4.24□□□□□ -1.73
SDCBPO00560 AC027279.1-201ENST00000568885 4284 ntBASIC4.24□□□□□ -1.73
SDCBPO00560 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SDCBPO00560 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SDCBPO00560 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.24□□□□□ -1.73
SDCBPO00560 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SDCBPO00560 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SDCBPO00560 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
SDCBPO00560 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.23□□□□□ -1.73
SDCBPO00560 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.23□□□□□ -1.73
SDCBPO00560 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SDCBPO00560 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SDCBPO00560 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SDCBPO00560 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SDCBPO00560 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SDCBPO00560 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.23□□□□□ -1.73
SDCBPO00560 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SDCBPO00560 RN7SKP160-201ENST00000363804 340 ntBASIC4.23□□□□□ -1.73
SDCBPO00560 RNA5SP435-201ENST00000364044 108 ntBASIC4.23□□□□□ -1.73
SDCBPO00560 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.23□□□□□ -1.73
SDCBPO00560 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.23□□□□□ -1.73
SDCBPO00560 U3.25-201ENST00000391209 220 ntBASIC4.23□□□□□ -1.73
SDCBPO00560 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SDCBPO00560 SETP15-201ENST00000412724 337 ntBASIC4.23□□□□□ -1.73
SDCBPO00560 TRGV5P-201ENST00000419915 354 ntBASIC4.23□□□□□ -1.73
SDCBPO00560 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.23□□□□□ -1.73
SDCBPO00560 RPS4XP1-201ENST00000482189 787 ntBASIC4.23□□□□□ -1.73
SDCBPO00560 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SDCBPO00560 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.23□□□□□ -1.73
SDCBPO00560 RN7SKP46-201ENST00000515942 234 ntBASIC4.23□□□□□ -1.73
SDCBPO00560 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.23□□□□□ -1.73
SDCBPO00560 IGKV3D-34-201ENST00000522638 302 ntBASIC4.23□□□□□ -1.73
SDCBPO00560 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.23□□□□□ -1.73
SDCBPO00560 AC024940.3-201ENST00000538551 316 ntBASIC4.23□□□□□ -1.73
SDCBPO00560 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.23□□□□□ -1.73
SDCBPO00560 AL049830.4-201ENST00000555149 351 ntBASIC4.23□□□□□ -1.73
SDCBPO00560 AC116553.2-201ENST00000564203 463 ntBASIC4.23□□□□□ -1.73
SDCBPO00560 AC012146.2-201ENST00000576545 416 ntBASIC4.23□□□□□ -1.73
SDCBPO00560 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.23□□□□□ -1.73
SDCBPO00560 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.23□□□□□ -1.73
SDCBPO00560 AC006272.2-201ENST00000594725 163 ntBASIC4.23□□□□□ -1.73
SDCBPO00560 AC011445.2-201ENST00000599274 173 ntBASIC4.23□□□□□ -1.73
SDCBPO00560 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.23□□□□□ -1.73
SDCBPO00560 AP005432.2-201ENST00000608162 586 ntBASIC4.23□□□□□ -1.73
SDCBPO00560 AP002505.2-201ENST00000623585 696 ntBASIC4.23□□□□□ -1.73
SDCBPO00560 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.23□□□□□ -1.73
SDCBPO00560 AL672167.1-203ENST00000641299 2975 ntBASIC4.23□□□□□ -1.73
SDCBPO00560 BRAFP1-201ENST00000445336 2703 ntBASIC4.23□□□□□ -1.73
SDCBPO00560 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.23□□□□□ -1.73
SDCBPO00560 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SDCBPO00560 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SDCBPO00560 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SDCBPO00560 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SDCBPO00560 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.23□□□□□ -1.73
SDCBPO00560 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SDCBPO00560 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SDCBPO00560 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.23□□□□□ -1.73
SDCBPO00560 AC235565.1-201ENST00000456962 1325 ntBASIC4.22□□□□□ -1.73
SDCBPO00560 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SDCBPO00560 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SDCBPO00560 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
SDCBPO00560 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
SDCBPO00560 OR56A4-201ENST00000330728 1209 ntBASIC4.22□□□□□ -1.73
SDCBPO00560 MIR1182-201ENST00000408363 97 ntBASIC4.22□□□□□ -1.73
SDCBPO00560 RN7SKP126-201ENST00000411143 300 ntBASIC4.22□□□□□ -1.73
SDCBPO00560 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.22□□□□□ -1.73
SDCBPO00560 QRSL1P2-201ENST00000418582 964 ntBASIC4.22□□□□□ -1.73
SDCBPO00560 SLC35E1P1-201ENST00000419313 864 ntBASIC4.22□□□□□ -1.73
SDCBPO00560 EI24P4-201ENST00000423683 1078 ntBASIC4.22□□□□□ -1.73
SDCBPO00560 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms