Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AL121578.2-201ENST00000448797 447 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 HLA-DPA3-207ENST00000454398 229 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 RN7SL223P-201ENST00000470401 294 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 RN7SL583P-201ENST00000475692 287 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 RN7SL70P-201ENST00000478322 302 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AC044810.1-201ENST00000480271 711 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AC012158.1-204ENST00000483430 465 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 EFCAB10-204ENST00000485614 799 ntTSL 5 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 RN7SL702P-201ENST00000488394 292 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AC068305.1-201ENST00000497406 726 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AC139783.2-201ENST00000504847 1145 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AC137549.1-201ENST00000514243 533 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AC009879.1-201ENST00000520029 839 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 IGKV2OR22-4-201ENST00000523309 367 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AP003122.2-201ENST00000527332 486 ntTSL 3 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 REG4-204ENST00000530654 612 ntTSL 5 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 DCN-215ENST00000550099 719 ntTSL 2 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AP005403.1-201ENST00000579720 229 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AC026898.1-201ENST00000586404 571 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 RPS4XP21-201ENST00000603814 750 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AC009597.2-201ENST00000604659 592 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AC012510.1-201ENST00000607946 759 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AC097717.1-251ENST00000608419 183 ntTSL 5 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 MIR6751-201ENST00000610479 63 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 MIR6776-201ENST00000616678 59 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AC023509.5-201ENST00000617434 807 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 TEX41-265ENST00000627785 704 ntTSL 5 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AC053481.2-202ENST00000582394 1500 ntBASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CHKB-CPT1BH3BT56 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 SAMMSON-226ENST00000642089 1582 ntBASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 SPIN2B-201ENST00000275988 1152 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 OR1K1-201ENST00000277309 951 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 GAPDHP24-201ENST00000328713 983 ntBASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 SNORA21-201ENST00000362423 132 ntBASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 RN7SKP191-201ENST00000364713 306 ntBASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 RNU6-1263P-201ENST00000384601 106 ntBASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 MIR551A-201ENST00000385042 96 ntBASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 RN7SKP56-201ENST00000410513 331 ntBASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AC004129.1-201ENST00000417617 796 ntBASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AL360013.1-201ENST00000419031 858 ntBASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AL359633.1-201ENST00000421403 310 ntBASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AL672212.1-201ENST00000422246 400 ntBASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 RPS27P18-201ENST00000431701 247 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms