Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 OR9G4-201ENST00000302957 984 ntBASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 RN7SKP292-201ENST00000365522 317 ntBASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 HMGN1P20-201ENST00000411849 300 ntBASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 AC106883.1-201ENST00000418805 562 ntBASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 SRSF1P1-201ENST00000424058 520 ntBASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 VN1R42P-201ENST00000424651 344 ntBASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 SNRPFP2-201ENST00000440710 251 ntBASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 PRPF38AP1-201ENST00000451976 933 ntBASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 AC098976.1-201ENST00000513014 541 ntBASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 EIF3KP3-201ENST00000514461 639 ntBASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 AC079600.1-201ENST00000550326 297 ntBASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 AL359219.2-201ENST00000555184 348 ntBASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 GLRXP2-201ENST00000555594 321 ntBASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 RBM22P12-201ENST00000567098 1255 ntBASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 AC021483.2-201ENST00000567415 758 ntBASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 RN7SL339P-201ENST00000580597 296 ntBASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 RN7SL356P-201ENST00000582228 248 ntBASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 CBX3P2-202ENST00000583365 535 ntBASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 PRPF19P1-201ENST00000584766 898 ntBASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 AC026741.1-201ENST00000605892 482 ntBASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 AC021851.1-201ENST00000608537 1082 ntBASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 AC091932.2-201ENST00000623014 291 ntBASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 AC132068.1-201ENST00000623805 459 ntBASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 AL627171.1-201ENST00000618845 1308 ntBASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 AL450345.1-202ENST00000605741 3881 ntBASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 AC137056.2-201ENST00000624055 1958 ntBASIC5.46□□□□□ -1.54
TCRBV7S3A2A0A539 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 AC079298.1-201ENST00000625026 1619 ntBASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 OR56A4-201ENST00000330728 1209 ntBASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 RNA5SP46-201ENST00000362370 120 ntBASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 RNU6-316P-201ENST00000391027 107 ntBASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 VN1R12P-201ENST00000403778 876 ntBASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 BMS1P17-202ENST00000416720 316 ntBASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 RPS3P2-201ENST00000421346 701 ntBASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 AP000797.2-201ENST00000475768 606 ntBASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 RN7SL741P-201ENST00000482473 289 ntBASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 PPM1AP1-201ENST00000502740 1135 ntBASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 PSMA2P2-201ENST00000504319 686 ntBASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 GOLGA5P1-201ENST00000507317 980 ntBASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 AC109481.1-201ENST00000509173 282 ntBASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 AC006116.5-201ENST00000591936 559 ntBASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 AC009027.1-201ENST00000604510 479 ntBASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 AC063944.3-201ENST00000609969 533 ntBASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 MIR6839-201ENST00000620425 113 ntBASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 CU639417.4-201ENST00000623928 207 ntBASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 AL121839.2-201ENST00000565058 6943 ntBASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 SSXP3-201ENST00000442971 1300 ntBASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TCRBV7S3A2A0A539 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms