Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 RNU4-40P-201ENST00000364351 143 ntBASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 AC092638.1-201ENST00000411966 1275 ntBASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 KRR1P1-201ENST00000419430 803 ntBASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 RPS6P15-201ENST00000431996 751 ntBASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 H3F3BP1-201ENST00000440551 403 ntBASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 AL589880.1-201ENST00000448271 287 ntBASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 SDC4P-201ENST00000453285 601 ntBASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 AC104164.1-201ENST00000460282 590 ntBASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 AC021205.1-201ENST00000468797 348 ntBASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 AC092865.4-201ENST00000477936 615 ntBASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 SCARNA18.1-201ENST00000516330 83 ntBASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 IGKV2-19-201ENST00000518132 283 ntBASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 AC079600.1-201ENST00000550326 297 ntBASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 MTND4P33-201ENST00000556706 766 ntBASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 RBM22P12-201ENST00000567098 1255 ntBASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 AC016180.1-201ENST00000567945 403 ntBASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 RBM22P1-201ENST00000578589 1214 ntBASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 AC092954.1-201ENST00000609121 445 ntBASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 AL352984.2-201ENST00000611153 546 ntBASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 RNA5SP440-201ENST00000612665 119 ntBASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 AL136228.1-201ENST00000622221 319 ntBASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 AL357562.1-201ENST00000624911 609 ntBASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 AC022164.1-201ENST00000568767 2673 ntBASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 MIR1203-201ENST00000408812 85 ntBASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 AP000357.1-201ENST00000409926 1165 ntBASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 AL354890.1-201ENST00000413730 346 ntBASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 RPL23AP4-201ENST00000427757 463 ntBASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 HMGB3P10-201ENST00000434734 572 ntBASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 AC064862.4-201ENST00000442180 334 ntBASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 AP000281.1-201ENST00000444036 316 ntBASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 AC004022.1-201ENST00000447766 1066 ntBASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 YWHAEP1-201ENST00000453697 763 ntBASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 AL035407.2-201ENST00000454090 378 ntBASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 AC004263.1-201ENST00000479327 332 ntBASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 AC087672.1-201ENST00000479876 766 ntBASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 TRBV5-2-201ENST00000489095 273 ntBASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 AL136038.1-201ENST00000497246 351 ntBASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 RNA5SP362-201ENST00000516048 118 ntBASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 PCNAP1-202ENST00000595299 752 ntBASIC5.94□□□□□ -1.46
PCDHB1Q9Y5F3 AC114878.2-201ENST00000604863 1251 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms