Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 RN7SL814P-201ENST00000487715 300 ntBASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 SNRPCP11-201ENST00000492453 205 ntBASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 RBBP4P1-201ENST00000502424 1276 ntBASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 SEC11B-201ENST00000518383 499 ntBASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 AC134698.5-201ENST00000519444 336 ntBASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 MRPS16P1-201ENST00000523462 412 ntBASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 AC107918.3-201ENST00000533272 382 ntBASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 AC005341.1-201ENST00000571086 708 ntBASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 MIR4502-201ENST00000580432 81 ntBASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 AC124916.2-201ENST00000604416 224 ntBASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 AC005252.1-201ENST00000604518 1063 ntBASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 AP001437.1-201ENST00000608783 456 ntBASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 RMST_5.1-201ENST00000618704 126 ntBASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 OR8G3P-202ENST00000641572 1255 ntBASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 AC073869.10-201ENST00000642016 354 ntBASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 CASC19-281ENST00000642118 1554 ntBASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
KCNIP3Q9Y2W7 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 COX6B1P3-201ENST00000312310 260 ntBASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 RNU4-7P-201ENST00000364758 141 ntBASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 ATP5F1P2-201ENST00000398143 760 ntBASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 OR7E101P-201ENST00000400428 513 ntBASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 OR5M12P-201ENST00000423388 929 ntBASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 AL139158.1-201ENST00000424719 340 ntBASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 OR2AH1P-201ENST00000425717 928 ntBASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 AP000936.3-201ENST00000438127 255 ntBASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 RN7SL189P-201ENST00000468631 289 ntBASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 AC011626.1-201ENST00000604710 562 ntBASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 AL391597.1-201ENST00000618707 694 ntBASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 AC087565.3-203ENST00000641018 837 ntBASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 5S_rRNA.29-201ENST00000641250 107 ntBASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 AC087190.4-201ENST00000574616 8334 ntBASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 NEPNP-201ENST00000404786 1371 ntBASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.38□□□□□ -1.71
KCNIP3Q9Y2W7 AL121950.1-201ENST00000624993 2077 ntBASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 TLK1P1-201ENST00000456760 2440 ntBASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 MRE11P1-201ENST00000464884 2127 ntBASIC4.37□□□□□ -1.71
KCNIP3Q9Y2W7 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms