Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.5□□□□□ -1.53
LRFN1Q9P244 FAM27E4-201ENST00000605259 342 ntBASIC5.5□□□□□ -1.53
LRFN1Q9P244 AL031601.1-201ENST00000605702 394 ntBASIC5.5□□□□□ -1.53
LRFN1Q9P244 AC139769.3-201ENST00000618383 175 ntBASIC5.5□□□□□ -1.53
LRFN1Q9P244 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.5□□□□□ -1.53
LRFN1Q9P244 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.5□□□□□ -1.53
LRFN1Q9P244 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.5□□□□□ -1.53
LRFN1Q9P244 AC020656.2-201ENST00000613291 5309 ntBASIC5.5□□□□□ -1.53
LRFN1Q9P244 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRFN1Q9P244 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
LRFN1Q9P244 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.5□□□□□ -1.53
LRFN1Q9P244 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRFN1Q9P244 AC100871.1-201ENST00000507871 1456 ntBASIC5.5□□□□□ -1.53
LRFN1Q9P244 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRFN1Q9P244 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
LRFN1Q9P244 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
LRFN1Q9P244 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRFN1Q9P244 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LRFN1Q9P244 AC006511.3-201ENST00000624929 1783 ntBASIC5.5□□□□□ -1.53
LRFN1Q9P244 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 PARP4P2-201ENST00000446672 3326 ntBASIC5.49□□□□□ -1.53
LRFN1Q9P244 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LRFN1Q9P244 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LRFN1Q9P244 MTND4P31-201ENST00000425607 1343 ntBASIC5.49□□□□□ -1.53
LRFN1Q9P244 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LRFN1Q9P244 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LRFN1Q9P244 AC073055.1-201ENST00000456901 1621 ntBASIC5.49□□□□□ -1.53
LRFN1Q9P244 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LRFN1Q9P244 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 SELENOWP1-201ENST00000322792 252 ntBASIC5.49□□□□□ -1.53
LRFN1Q9P244 RNU6-304P-201ENST00000364855 107 ntBASIC5.49□□□□□ -1.53
LRFN1Q9P244 AP003170.5-201ENST00000397185 335 ntBASIC5.49□□□□□ -1.53
LRFN1Q9P244 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 AL590290.1-201ENST00000405336 380 ntBASIC5.49□□□□□ -1.53
LRFN1Q9P244 RPS3AP2-201ENST00000407190 754 ntBASIC5.49□□□□□ -1.53
LRFN1Q9P244 AC245060.4-201ENST00000413293 1121 ntBASIC5.49□□□□□ -1.53
LRFN1Q9P244 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.49□□□□□ -1.53
LRFN1Q9P244 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LRFN1Q9P244 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 AC113412.1-201ENST00000425840 504 ntBASIC5.49□□□□□ -1.53
LRFN1Q9P244 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 MGAT2P2-201ENST00000427194 797 ntBASIC5.49□□□□□ -1.53
LRFN1Q9P244 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 BX323845.3-201ENST00000428215 527 ntBASIC5.49□□□□□ -1.53
LRFN1Q9P244 YWHAEP5-201ENST00000431545 765 ntBASIC5.49□□□□□ -1.53
LRFN1Q9P244 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 FHP1-201ENST00000442741 703 ntBASIC5.49□□□□□ -1.53
LRFN1Q9P244 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 AL445665.1-202ENST00000452436 324 ntBASIC5.49□□□□□ -1.53
LRFN1Q9P244 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 SNRPCP3-201ENST00000474888 476 ntBASIC5.49□□□□□ -1.53
LRFN1Q9P244 RN7SL165P-201ENST00000477476 291 ntBASIC5.49□□□□□ -1.53
LRFN1Q9P244 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LRFN1Q9P244 RPL7AP10-201ENST00000481016 791 ntBASIC5.49□□□□□ -1.53
LRFN1Q9P244 RPS4XP14-201ENST00000493072 781 ntBASIC5.49□□□□□ -1.53
LRFN1Q9P244 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 AC008629.2-201ENST00000503783 483 ntBASIC5.49□□□□□ -1.53
LRFN1Q9P244 AC096571.1-202ENST00000506634 735 ntBASIC5.49□□□□□ -1.53
LRFN1Q9P244 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 RNA5SP303-201ENST00000516192 130 ntBASIC5.49□□□□□ -1.53
LRFN1Q9P244 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 TPM3P3-201ENST00000521343 354 ntBASIC5.49□□□□□ -1.53
LRFN1Q9P244 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 AP001804.1-201ENST00000526868 919 ntBASIC5.49□□□□□ -1.53
LRFN1Q9P244 AC079064.1-201ENST00000528365 362 ntBASIC5.49□□□□□ -1.53
LRFN1Q9P244 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LRFN1Q9P244 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 AC006946.3-201ENST00000609791 756 ntBASIC5.49□□□□□ -1.53
LRFN1Q9P244 CYCSP41-201ENST00000616920 296 ntBASIC5.49□□□□□ -1.53
LRFN1Q9P244 U6.48-201ENST00000618523 106 ntBASIC5.49□□□□□ -1.53
LRFN1Q9P244 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 AC139713.2-210ENST00000641741 992 ntBASIC5.49□□□□□ -1.53
LRFN1Q9P244 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LRFN1Q9P244 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
LRFN1Q9P244 AL137141.1-201ENST00000624622 4836 ntBASIC5.49□□□□□ -1.53
LRFN1Q9P244 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 AL731532.1-201ENST00000623972 4236 ntBASIC5.49□□□□□ -1.53
LRFN1Q9P244 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.49□□□□□ -1.53
LRFN1Q9P244 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
LRFN1Q9P244 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
LRFN1Q9P244 CIR1P2-201ENST00000514821 1342 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms