Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.17□□□□□ -1.42
COL20A1Q9P218 NDUFA5P12-201ENST00000503796 343 ntBASIC6.17□□□□□ -1.42
COL20A1Q9P218 AC021106.1-201ENST00000509020 1058 ntBASIC6.17□□□□□ -1.42
COL20A1Q9P218 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.17□□□□□ -1.42
COL20A1Q9P218 OR10G5P-201ENST00000532733 358 ntBASIC6.17□□□□□ -1.42
COL20A1Q9P218 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.17□□□□□ -1.42
COL20A1Q9P218 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.17□□□□□ -1.42
COL20A1Q9P218 OR11H3P-201ENST00000554547 982 ntBASIC6.17□□□□□ -1.42
COL20A1Q9P218 GLRXP2-201ENST00000555594 321 ntBASIC6.17□□□□□ -1.42
COL20A1Q9P218 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.17□□□□□ -1.42
COL20A1Q9P218 MIR3691-201ENST00000578066 90 ntBASIC6.17□□□□□ -1.42
COL20A1Q9P218 CBX3P2-202ENST00000583365 535 ntBASIC6.17□□□□□ -1.42
COL20A1Q9P218 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.17□□□□□ -1.42
COL20A1Q9P218 AC069307.1-201ENST00000602820 447 ntBASIC6.17□□□□□ -1.42
COL20A1Q9P218 AL139407.1-201ENST00000613826 1175 ntBASIC6.17□□□□□ -1.42
COL20A1Q9P218 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.17□□□□□ -1.42
COL20A1Q9P218 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.17□□□□□ -1.42
COL20A1Q9P218 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
COL20A1Q9P218 AC135068.5-201ENST00000624197 983 ntBASIC6.17□□□□□ -1.42
COL20A1Q9P218 AC010608.3-201ENST00000625048 527 ntBASIC6.17□□□□□ -1.42
COL20A1Q9P218 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC6.17□□□□□ -1.42
COL20A1Q9P218 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
COL20A1Q9P218 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL20A1Q9P218 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL20A1Q9P218 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
COL20A1Q9P218 AC140479.2-201ENST00000421567 3130 ntBASIC6.17□□□□□ -1.42
COL20A1Q9P218 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL20A1Q9P218 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL20A1Q9P218 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL20A1Q9P218 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
COL20A1Q9P218 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL20A1Q9P218 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL20A1Q9P218 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL20A1Q9P218 AC232271.1-201ENST00000602455 2715 ntBASIC6.16□□□□□ -1.42
COL20A1Q9P218 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL20A1Q9P218 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
COL20A1Q9P218 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL20A1Q9P218 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC6.16□□□□□ -1.42
COL20A1Q9P218 SNORA67-201ENST00000384423 137 ntBASIC6.16□□□□□ -1.42
COL20A1Q9P218 MIR122-201ENST00000385044 85 ntBASIC6.16□□□□□ -1.42
COL20A1Q9P218 DUTP5-201ENST00000406790 469 ntBASIC6.16□□□□□ -1.42
COL20A1Q9P218 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC6.16□□□□□ -1.42
COL20A1Q9P218 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.16□□□□□ -1.42
COL20A1Q9P218 AC013262.1-201ENST00000426710 252 ntBASIC6.16□□□□□ -1.42
COL20A1Q9P218 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC6.16□□□□□ -1.42
COL20A1Q9P218 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.16□□□□□ -1.42
COL20A1Q9P218 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC6.16□□□□□ -1.42
COL20A1Q9P218 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.16□□□□□ -1.42
COL20A1Q9P218 MTCYBP21-201ENST00000443300 1113 ntBASIC6.16□□□□□ -1.42
COL20A1Q9P218 AL353898.1-201ENST00000444055 238 ntBASIC6.16□□□□□ -1.42
COL20A1Q9P218 AL606517.1-201ENST00000446914 387 ntBASIC6.16□□□□□ -1.42
COL20A1Q9P218 AC128716.1-201ENST00000475129 166 ntBASIC6.16□□□□□ -1.42
COL20A1Q9P218 LARP7P4-201ENST00000481075 878 ntBASIC6.16□□□□□ -1.42
COL20A1Q9P218 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.16□□□□□ -1.42
COL20A1Q9P218 AC109464.1-201ENST00000511091 819 ntBASIC6.16□□□□□ -1.42
COL20A1Q9P218 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.16□□□□□ -1.42
COL20A1Q9P218 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL20A1Q9P218 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC6.16□□□□□ -1.42
COL20A1Q9P218 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.16□□□□□ -1.42
COL20A1Q9P218 OR8G3P-201ENST00000533406 921 ntBASIC6.16□□□□□ -1.42
COL20A1Q9P218 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.16□□□□□ -1.42
COL20A1Q9P218 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC6.16□□□□□ -1.42
COL20A1Q9P218 CD24P2-201ENST00000565486 219 ntBASIC6.16□□□□□ -1.42
COL20A1Q9P218 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.16□□□□□ -1.42
COL20A1Q9P218 EIF1P5-201ENST00000585002 234 ntBASIC6.16□□□□□ -1.42
COL20A1Q9P218 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.16□□□□□ -1.42
COL20A1Q9P218 AC005034.4-201ENST00000603612 899 ntBASIC6.16□□□□□ -1.42
COL20A1Q9P218 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL20A1Q9P218 AC004241.3-201ENST00000611728 517 ntBASIC6.16□□□□□ -1.42
COL20A1Q9P218 MIR7155-201ENST00000615925 56 ntBASIC6.16□□□□□ -1.42
COL20A1Q9P218 AC007275.1-201ENST00000621243 671 ntBASIC6.16□□□□□ -1.42
COL20A1Q9P218 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC6.16□□□□□ -1.42
COL20A1Q9P218 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.16□□□□□ -1.42
COL20A1Q9P218 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.16□□□□□ -1.42
COL20A1Q9P218 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
COL20A1Q9P218 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.16□□□□□ -1.42
COL20A1Q9P218 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC6.16□□□□□ -1.42
COL20A1Q9P218 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC6.16□□□□□ -1.42
COL20A1Q9P218 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.16□□□□□ -1.42
COL20A1Q9P218 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.16□□□□□ -1.42
COL20A1Q9P218 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL20A1Q9P218 MRRFP1-201ENST00000435941 1675 ntBASIC6.16□□□□□ -1.42
COL20A1Q9P218 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL20A1Q9P218 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL20A1Q9P218 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL20A1Q9P218 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.16□□□□□ -1.42
COL20A1Q9P218 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.15□□□□□ -1.42
COL20A1Q9P218 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL20A1Q9P218 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.15□□□□□ -1.42
COL20A1Q9P218 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COL20A1Q9P218 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COL20A1Q9P218 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.15□□□□□ -1.42
COL20A1Q9P218 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.15□□□□□ -1.42
COL20A1Q9P218 MTND5P23-201ENST00000430812 1655 ntBASIC6.15□□□□□ -1.42
COL20A1Q9P218 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.15□□□□□ -1.42
COL20A1Q9P218 RNU1-43P-201ENST00000365052 165 ntBASIC6.15□□□□□ -1.42
COL20A1Q9P218 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL20A1Q9P218 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.15□□□□□ -1.42
COL20A1Q9P218 RPL7P58-201ENST00000402913 758 ntBASIC6.15□□□□□ -1.42
COL20A1Q9P218 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms