Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.78□□□□□ -1.64
VAPAQ9P0L0 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
VAPAQ9P0L0 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.78□□□□□ -1.64
VAPAQ9P0L0 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VAPAQ9P0L0 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.78□□□□□ -1.64
VAPAQ9P0L0 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VAPAQ9P0L0 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VAPAQ9P0L0 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
VAPAQ9P0L0 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
VAPAQ9P0L0 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.77□□□□□ -1.65
VAPAQ9P0L0 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VAPAQ9P0L0 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VAPAQ9P0L0 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VAPAQ9P0L0 NAMPTP1-201ENST00000440465 2514 ntBASIC4.77□□□□□ -1.65
VAPAQ9P0L0 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VAPAQ9P0L0 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VAPAQ9P0L0 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
VAPAQ9P0L0 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
VAPAQ9P0L0 AC107977.1-201ENST00000355745 939 ntBASIC4.77□□□□□ -1.65
VAPAQ9P0L0 RN7SKP113-201ENST00000363891 295 ntBASIC4.77□□□□□ -1.65
VAPAQ9P0L0 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
VAPAQ9P0L0 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
VAPAQ9P0L0 MIR1271-201ENST00000408537 86 ntBASIC4.77□□□□□ -1.65
VAPAQ9P0L0 RN7SKP97-201ENST00000410966 333 ntBASIC4.77□□□□□ -1.65
VAPAQ9P0L0 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.77□□□□□ -1.65
VAPAQ9P0L0 TMBIM7P-201ENST00000418074 855 ntBASIC4.77□□□□□ -1.65
VAPAQ9P0L0 AC093655.2-201ENST00000425735 631 ntBASIC4.77□□□□□ -1.65
VAPAQ9P0L0 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.77□□□□□ -1.65
VAPAQ9P0L0 AL589765.3-201ENST00000446084 462 ntBASIC4.77□□□□□ -1.65
VAPAQ9P0L0 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.77□□□□□ -1.65
VAPAQ9P0L0 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.77□□□□□ -1.65
VAPAQ9P0L0 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.77□□□□□ -1.65
VAPAQ9P0L0 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.77□□□□□ -1.65
VAPAQ9P0L0 AC138938.1-201ENST00000515431 782 ntBASIC4.77□□□□□ -1.65
VAPAQ9P0L0 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.77□□□□□ -1.65
VAPAQ9P0L0 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.77□□□□□ -1.65
VAPAQ9P0L0 AC134349.2-201ENST00000535136 910 ntBASIC4.77□□□□□ -1.65
VAPAQ9P0L0 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.77□□□□□ -1.65
VAPAQ9P0L0 AL390726.5-202ENST00000564800 256 ntBASIC4.77□□□□□ -1.65
VAPAQ9P0L0 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.77□□□□□ -1.65
VAPAQ9P0L0 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.77□□□□□ -1.65
VAPAQ9P0L0 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.77□□□□□ -1.65
VAPAQ9P0L0 AC015849.6-201ENST00000605454 474 ntBASIC4.77□□□□□ -1.65
VAPAQ9P0L0 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.77□□□□□ -1.65
VAPAQ9P0L0 AL512356.3-201ENST00000623005 461 ntBASIC4.77□□□□□ -1.65
VAPAQ9P0L0 AC015660.5-201ENST00000623238 564 ntBASIC4.77□□□□□ -1.65
VAPAQ9P0L0 AL138820.1-201ENST00000617901 5305 ntBASIC4.77□□□□□ -1.65
VAPAQ9P0L0 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.77□□□□□ -1.65
VAPAQ9P0L0 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VAPAQ9P0L0 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
VAPAQ9P0L0 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
VAPAQ9P0L0 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VAPAQ9P0L0 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.77□□□□□ -1.65
VAPAQ9P0L0 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
VAPAQ9P0L0 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
VAPAQ9P0L0 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VAPAQ9P0L0 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VAPAQ9P0L0 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VAPAQ9P0L0 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VAPAQ9P0L0 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VAPAQ9P0L0 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.76□□□□□ -1.65
VAPAQ9P0L0 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VAPAQ9P0L0 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
VAPAQ9P0L0 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.76□□□□□ -1.65
VAPAQ9P0L0 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
VAPAQ9P0L0 METTL5-202ENST00000308099 629 ntTSL 3 BASIC4.76□□□□□ -1.65
VAPAQ9P0L0 LRRC37BP1-201ENST00000398851 714 ntBASIC4.76□□□□□ -1.65
VAPAQ9P0L0 VDAC2P1-201ENST00000399358 958 ntBASIC4.76□□□□□ -1.65
VAPAQ9P0L0 AL359643.1-201ENST00000404109 423 ntBASIC4.76□□□□□ -1.65
VAPAQ9P0L0 RN7SKP286-201ENST00000410894 299 ntBASIC4.76□□□□□ -1.65
VAPAQ9P0L0 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.76□□□□□ -1.65
VAPAQ9P0L0 QRSL1P2-201ENST00000418582 964 ntBASIC4.76□□□□□ -1.65
VAPAQ9P0L0 SALL4P2-201ENST00000423288 2910 ntBASIC4.76□□□□□ -1.65
VAPAQ9P0L0 RPS26P4-201ENST00000431743 355 ntBASIC4.76□□□□□ -1.65
VAPAQ9P0L0 AL389925.1-201ENST00000432257 728 ntBASIC4.76□□□□□ -1.65
VAPAQ9P0L0 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.76□□□□□ -1.65
VAPAQ9P0L0 RPS27AP2-201ENST00000457576 465 ntBASIC4.76□□□□□ -1.65
VAPAQ9P0L0 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.76□□□□□ -1.65
VAPAQ9P0L0 RNA5SP103-201ENST00000459503 118 ntBASIC4.76□□□□□ -1.65
VAPAQ9P0L0 AL591473.1-201ENST00000464297 313 ntBASIC4.76□□□□□ -1.65
VAPAQ9P0L0 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.76□□□□□ -1.65
VAPAQ9P0L0 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.76□□□□□ -1.65
VAPAQ9P0L0 AC090686.1-201ENST00000481577 749 ntBASIC4.76□□□□□ -1.65
VAPAQ9P0L0 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.76□□□□□ -1.65
VAPAQ9P0L0 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
VAPAQ9P0L0 MTND2P17-201ENST00000550281 688 ntBASIC4.76□□□□□ -1.65
VAPAQ9P0L0 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VAPAQ9P0L0 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
VAPAQ9P0L0 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.76□□□□□ -1.65
VAPAQ9P0L0 AL513548.1-201ENST00000562904 1724 ntBASIC4.76□□□□□ -1.65
VAPAQ9P0L0 CYCSP40-201ENST00000575927 294 ntBASIC4.76□□□□□ -1.65
VAPAQ9P0L0 AC233702.9-201ENST00000581528 203 ntBASIC4.76□□□□□ -1.65
VAPAQ9P0L0 AL359513.1-201ENST00000614364 557 ntBASIC4.76□□□□□ -1.65
VAPAQ9P0L0 AC022106.2-201ENST00000620114 757 ntBASIC4.76□□□□□ -1.65
VAPAQ9P0L0 SAMMSON-209ENST00000641222 1100 ntBASIC4.76□□□□□ -1.65
VAPAQ9P0L0 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
VAPAQ9P0L0 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
VAPAQ9P0L0 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VAPAQ9P0L0 PANDAR-201ENST00000629595 1506 ntBASIC4.76□□□□□ -1.65
VAPAQ9P0L0 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 157.3 ms