Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 GSTM5P1-201ENST00000434751 660 ntBASIC5.48□□□□□ -1.53
PCDH9Q9HC56 MRPS33P4-201ENST00000434892 317 ntBASIC5.48□□□□□ -1.53
PCDH9Q9HC56 AC046176.1-201ENST00000435260 1170 ntBASIC5.48□□□□□ -1.53
PCDH9Q9HC56 DNAJB5P1-201ENST00000454004 806 ntBASIC5.48□□□□□ -1.53
PCDH9Q9HC56 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.48□□□□□ -1.53
PCDH9Q9HC56 AC079168.1-201ENST00000458741 345 ntBASIC5.48□□□□□ -1.53
PCDH9Q9HC56 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.48□□□□□ -1.53
PCDH9Q9HC56 RN7SL184P-201ENST00000488308 297 ntBASIC5.48□□□□□ -1.53
PCDH9Q9HC56 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.48□□□□□ -1.53
PCDH9Q9HC56 RN7SL547P-201ENST00000490793 290 ntBASIC5.48□□□□□ -1.53
PCDH9Q9HC56 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.48□□□□□ -1.53
PCDH9Q9HC56 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.48□□□□□ -1.53
PCDH9Q9HC56 AC106872.4-201ENST00000510050 523 ntBASIC5.48□□□□□ -1.53
PCDH9Q9HC56 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.48□□□□□ -1.53
PCDH9Q9HC56 AC100784.1-201ENST00000522790 310 ntBASIC5.48□□□□□ -1.53
PCDH9Q9HC56 OR7E10P-201ENST00000526420 991 ntBASIC5.48□□□□□ -1.53
PCDH9Q9HC56 AP003049.1-201ENST00000529418 457 ntBASIC5.48□□□□□ -1.53
PCDH9Q9HC56 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.48□□□□□ -1.53
PCDH9Q9HC56 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCDH9Q9HC56 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDH9Q9HC56 AC010547.7-201ENST00000570323 333 ntBASIC5.48□□□□□ -1.53
PCDH9Q9HC56 AC005341.1-201ENST00000571086 708 ntBASIC5.48□□□□□ -1.53
PCDH9Q9HC56 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDH9Q9HC56 SUGT1P3-202ENST00000604259 383 ntBASIC5.48□□□□□ -1.53
PCDH9Q9HC56 AC084036.1-201ENST00000609190 508 ntBASIC5.48□□□□□ -1.53
PCDH9Q9HC56 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDH9Q9HC56 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.48□□□□□ -1.53
PCDH9Q9HC56 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.48□□□□□ -1.53
PCDH9Q9HC56 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDH9Q9HC56 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
PCDH9Q9HC56 AP001002.1-201ENST00000625148 1513 ntBASIC5.48□□□□□ -1.53
PCDH9Q9HC56 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCDH9Q9HC56 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.48□□□□□ -1.53
PCDH9Q9HC56 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDH9Q9HC56 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.47□□□□□ -1.53
PCDH9Q9HC56 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDH9Q9HC56 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.47□□□□□ -1.53
PCDH9Q9HC56 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDH9Q9HC56 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
PCDH9Q9HC56 AC104623.2-202ENST00000623477 4002 ntBASIC5.47□□□□□ -1.53
PCDH9Q9HC56 RNU6-249P-201ENST00000363016 102 ntBASIC5.47□□□□□ -1.53
PCDH9Q9HC56 SNORA27.3-201ENST00000364937 134 ntBASIC5.47□□□□□ -1.53
PCDH9Q9HC56 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PCDH9Q9HC56 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDH9Q9HC56 OR3A2-201ENST00000408891 1076 ntBASIC5.47□□□□□ -1.53
PCDH9Q9HC56 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.47□□□□□ -1.53
PCDH9Q9HC56 PCNPP4-201ENST00000414817 517 ntBASIC5.47□□□□□ -1.53
PCDH9Q9HC56 SEC63P1-201ENST00000425785 1258 ntBASIC5.47□□□□□ -1.53
PCDH9Q9HC56 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDH9Q9HC56 MTND4LP14-201ENST00000429447 288 ntBASIC5.47□□□□□ -1.53
PCDH9Q9HC56 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.47□□□□□ -1.53
PCDH9Q9HC56 AC074367.1-201ENST00000438685 1125 ntBASIC5.47□□□□□ -1.53
PCDH9Q9HC56 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.47□□□□□ -1.53
PCDH9Q9HC56 NOP56P2-201ENST00000447491 769 ntBASIC5.47□□□□□ -1.53
PCDH9Q9HC56 VN1R48P-201ENST00000448149 1036 ntBASIC5.47□□□□□ -1.53
PCDH9Q9HC56 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.47□□□□□ -1.53
PCDH9Q9HC56 AL353718.1-201ENST00000451028 517 ntBASIC5.47□□□□□ -1.53
PCDH9Q9HC56 AC245028.2-201ENST00000458673 253 ntBASIC5.47□□□□□ -1.53
PCDH9Q9HC56 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC5.47□□□□□ -1.53
PCDH9Q9HC56 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.47□□□□□ -1.53
PCDH9Q9HC56 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.47□□□□□ -1.53
PCDH9Q9HC56 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.47□□□□□ -1.53
PCDH9Q9HC56 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.47□□□□□ -1.53
PCDH9Q9HC56 SNORA70.11-201ENST00000515987 138 ntBASIC5.47□□□□□ -1.53
PCDH9Q9HC56 SNORA70.13-201ENST00000516116 138 ntBASIC5.47□□□□□ -1.53
PCDH9Q9HC56 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.47□□□□□ -1.53
PCDH9Q9HC56 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDH9Q9HC56 AC005000.1-201ENST00000536192 288 ntBASIC5.47□□□□□ -1.53
PCDH9Q9HC56 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC5.47□□□□□ -1.53
PCDH9Q9HC56 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.47□□□□□ -1.53
PCDH9Q9HC56 BLZF2P-201ENST00000553776 1130 ntBASIC5.47□□□□□ -1.53
PCDH9Q9HC56 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDH9Q9HC56 AC010487.1-201ENST00000594408 1172 ntBASIC5.47□□□□□ -1.53
PCDH9Q9HC56 BNIP3P19-201ENST00000605397 577 ntBASIC5.47□□□□□ -1.53
PCDH9Q9HC56 AC007204.2-201ENST00000615022 616 ntBASIC5.47□□□□□ -1.53
PCDH9Q9HC56 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.47□□□□□ -1.53
PCDH9Q9HC56 AL590396.2-201ENST00000636511 1041 ntBASIC5.47□□□□□ -1.53
PCDH9Q9HC56 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
PCDH9Q9HC56 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
PCDH9Q9HC56 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.47□□□□□ -1.53
PCDH9Q9HC56 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.47□□□□□ -1.53
PCDH9Q9HC56 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PCDH9Q9HC56 AC023421.1-201ENST00000590535 1785 ntBASIC5.47□□□□□ -1.53
PCDH9Q9HC56 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDH9Q9HC56 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
PCDH9Q9HC56 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.46□□□□□ -1.53
PCDH9Q9HC56 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.46□□□□□ -1.53
PCDH9Q9HC56 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.53
PCDH9Q9HC56 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
PCDH9Q9HC56 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
PCDH9Q9HC56 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDH9Q9HC56 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDH9Q9HC56 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDH9Q9HC56 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PCDH9Q9HC56 AC005294.1-201ENST00000355509 281 ntBASIC5.46□□□□□ -1.54
PCDH9Q9HC56 MIR133B-201ENST00000362210 119 ntBASIC5.46□□□□□ -1.54
PCDH9Q9HC56 RNU6-1331P-201ENST00000363658 106 ntBASIC5.46□□□□□ -1.54
PCDH9Q9HC56 MIR589-201ENST00000385238 99 ntBASIC5.46□□□□□ -1.54
PCDH9Q9HC56 U3.25-201ENST00000391209 220 ntBASIC5.46□□□□□ -1.54
PCDH9Q9HC56 AL133388.1-201ENST00000404509 287 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 148.3 ms