Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
LRTM1Q9HBL6 AC011447.7-201ENST00000624228 1590 ntBASIC4.91□□□□□ -1.62
LRTM1Q9HBL6 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LRTM1Q9HBL6 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
LRTM1Q9HBL6 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
LRTM1Q9HBL6 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
LRTM1Q9HBL6 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
LRTM1Q9HBL6 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
LRTM1Q9HBL6 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
LRTM1Q9HBL6 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
LRTM1Q9HBL6 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 RN7SKP113-201ENST00000363891 295 ntBASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 MIR600-201ENST00000385007 98 ntBASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 RPL37P18-201ENST00000411602 243 ntBASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 RN7SL443P-201ENST00000464331 290 ntBASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 COPS8P2-201ENST00000473228 627 ntBASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 RPL7P39-201ENST00000481157 744 ntBASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 AC069304.1-201ENST00000491593 704 ntBASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 AC073073.1-201ENST00000493920 463 ntBASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 CDH12P4-201ENST00000517835 295 ntBASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 CDH12P3-201ENST00000517935 295 ntBASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 CDH12P1-201ENST00000518435 295 ntBASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 AC004825.1-201ENST00000555068 586 ntBASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 AP005432.2-201ENST00000608162 586 ntBASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 THAP12P5-201ENST00000405864 2275 ntBASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
LRTM1Q9HBL6 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 OR9K1P-202ENST00000641111 3217 ntBASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 MIR1286-201ENST00000408112 78 ntBASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 OR5M12P-201ENST00000423388 929 ntBASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 AC092017.2-201ENST00000427600 362 ntBASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 AC093166.2-201ENST00000455969 1017 ntBASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 AC093270.2-201ENST00000486157 792 ntBASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 RN7SL441P-201ENST00000492388 296 ntBASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 AC134349.2-201ENST00000535136 910 ntBASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 AC127381.1-201ENST00000555979 939 ntBASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 AGGF1P9-201ENST00000561884 913 ntBASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 MIR7155-201ENST00000615925 56 ntBASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 AC136428.4-201ENST00000634254 1155 ntBASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.89□□□□□ -1.63
LRTM1Q9HBL6 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.88□□□□□ -1.63
LRTM1Q9HBL6 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LRTM1Q9HBL6 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LRTM1Q9HBL6 AL590763.1-201ENST00000398297 1545 ntBASIC4.88□□□□□ -1.63
LRTM1Q9HBL6 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms