Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 AP000357.1-201ENST00000409926 1165 ntBASIC5.34□□□□□ -1.55
BRF2Q9HAW0 RNU4-27P-201ENST00000410889 139 ntBASIC5.34□□□□□ -1.55
BRF2Q9HAW0 AL158050.1-201ENST00000416077 457 ntBASIC5.34□□□□□ -1.55
BRF2Q9HAW0 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 AL512637.2-201ENST00000431287 1256 ntBASIC5.34□□□□□ -1.55
BRF2Q9HAW0 MRPL50P1-201ENST00000431951 384 ntBASIC5.34□□□□□ -1.55
BRF2Q9HAW0 MTCO1P52-201ENST00000433928 531 ntBASIC5.34□□□□□ -1.55
BRF2Q9HAW0 NDUFB4P8-201ENST00000435351 367 ntBASIC5.34□□□□□ -1.55
BRF2Q9HAW0 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 GXYLT1P1-201ENST00000446657 490 ntBASIC5.34□□□□□ -1.55
BRF2Q9HAW0 AL445665.1-202ENST00000452436 324 ntBASIC5.34□□□□□ -1.55
BRF2Q9HAW0 HLA-DPA3-207ENST00000454398 229 ntBASIC5.34□□□□□ -1.55
BRF2Q9HAW0 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 RPEP1-201ENST00000504507 658 ntBASIC5.34□□□□□ -1.55
BRF2Q9HAW0 AC021106.1-201ENST00000509020 1058 ntBASIC5.34□□□□□ -1.55
BRF2Q9HAW0 SNORA70.11-201ENST00000515987 138 ntBASIC5.34□□□□□ -1.55
BRF2Q9HAW0 SNORA70.13-201ENST00000516116 138 ntBASIC5.34□□□□□ -1.55
BRF2Q9HAW0 RN7SKP70-201ENST00000516655 271 ntBASIC5.34□□□□□ -1.55
BRF2Q9HAW0 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 AL138895.2-201ENST00000603019 178 ntBASIC5.34□□□□□ -1.55
BRF2Q9HAW0 AC023813.4-201ENST00000607580 580 ntBASIC5.34□□□□□ -1.55
BRF2Q9HAW0 Z95327.3-201ENST00000610385 572 ntBASIC5.34□□□□□ -1.55
BRF2Q9HAW0 AL359513.1-201ENST00000614364 557 ntBASIC5.34□□□□□ -1.55
BRF2Q9HAW0 AC025574.2-201ENST00000615621 514 ntBASIC5.34□□□□□ -1.55
BRF2Q9HAW0 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
BRF2Q9HAW0 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
BRF2Q9HAW0 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
BRF2Q9HAW0 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.56
BRF2Q9HAW0 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 AC010266.2-201ENST00000564741 3255 ntBASIC5.33□□□□□ -1.56
BRF2Q9HAW0 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 AC106872.5-201ENST00000508856 1416 ntBASIC5.33□□□□□ -1.56
BRF2Q9HAW0 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 OR52B3P-201ENST00000314715 928 ntBASIC5.33□□□□□ -1.56
BRF2Q9HAW0 AC023490.2-201ENST00000359859 470 ntBASIC5.33□□□□□ -1.56
BRF2Q9HAW0 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 SNORA70.6-201ENST00000383934 134 ntBASIC5.33□□□□□ -1.56
BRF2Q9HAW0 GAPDHP42-201ENST00000406848 981 ntBASIC5.33□□□□□ -1.56
BRF2Q9HAW0 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 PNRC2P1-201ENST00000423940 420 ntBASIC5.33□□□□□ -1.56
BRF2Q9HAW0 AC009784.1-201ENST00000426484 460 ntBASIC5.33□□□□□ -1.56
BRF2Q9HAW0 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 FO393419.3-201ENST00000428741 282 ntBASIC5.33□□□□□ -1.56
BRF2Q9HAW0 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 CYCSP42-201ENST00000450823 238 ntBASIC5.33□□□□□ -1.56
BRF2Q9HAW0 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 LRRC37A14P-201ENST00000452297 462 ntBASIC5.33□□□□□ -1.56
BRF2Q9HAW0 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.33□□□□□ -1.56
BRF2Q9HAW0 AC091912.1-201ENST00000511351 248 ntBASIC5.33□□□□□ -1.56
BRF2Q9HAW0 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 C1DP5-201ENST00000525775 383 ntBASIC5.33□□□□□ -1.56
BRF2Q9HAW0 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 AC079064.1-201ENST00000528365 362 ntBASIC5.33□□□□□ -1.56
BRF2Q9HAW0 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms