Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC107977.1-201ENST00000355745 939 ntBASIC6.14□□□□□ -1.43
UPF2Q9HAU5 SNORA73.1-201ENST00000363107 205 ntBASIC6.14□□□□□ -1.43
UPF2Q9HAU5 RNA5SP234-201ENST00000363916 119 ntBASIC6.14□□□□□ -1.43
UPF2Q9HAU5 TRAV35-201ENST00000390462 330 ntBASIC6.14□□□□□ -1.43
UPF2Q9HAU5 RNU2-18P-201ENST00000411224 162 ntBASIC6.14□□□□□ -1.43
UPF2Q9HAU5 GABARAPL3-201ENST00000412799 354 ntBASIC6.14□□□□□ -1.43
UPF2Q9HAU5 Z68694.1-201ENST00000413929 841 ntBASIC6.14□□□□□ -1.43
UPF2Q9HAU5 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC6.14□□□□□ -1.43
UPF2Q9HAU5 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
UPF2Q9HAU5 RPL24P2-201ENST00000421023 475 ntBASIC6.14□□□□□ -1.43
UPF2Q9HAU5 AL133325.1-201ENST00000421090 382 ntBASIC6.14□□□□□ -1.43
UPF2Q9HAU5 RPS4XP16-201ENST00000427198 791 ntBASIC6.14□□□□□ -1.43
UPF2Q9HAU5 NMNAT1P2-201ENST00000435192 860 ntBASIC6.14□□□□□ -1.43
UPF2Q9HAU5 SUMO2P3-201ENST00000438311 288 ntBASIC6.14□□□□□ -1.43
UPF2Q9HAU5 MRPL48P1-201ENST00000445390 636 ntBASIC6.14□□□□□ -1.43
UPF2Q9HAU5 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
UPF2Q9HAU5 SIAH1P1-201ENST00000479411 923 ntBASIC6.14□□□□□ -1.43
UPF2Q9HAU5 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.14□□□□□ -1.43
UPF2Q9HAU5 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC6.14□□□□□ -1.43
UPF2Q9HAU5 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.14□□□□□ -1.43
UPF2Q9HAU5 IGKV2-4-201ENST00000523070 340 ntBASIC6.14□□□□□ -1.43
UPF2Q9HAU5 AC026616.1-201ENST00000523157 525 ntBASIC6.14□□□□□ -1.43
UPF2Q9HAU5 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.14□□□□□ -1.43
UPF2Q9HAU5 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
UPF2Q9HAU5 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC6.14□□□□□ -1.43
UPF2Q9HAU5 AC134669.1-201ENST00000581275 672 ntBASIC6.14□□□□□ -1.43
UPF2Q9HAU5 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.14□□□□□ -1.43
UPF2Q9HAU5 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC6.14□□□□□ -1.43
UPF2Q9HAU5 AL512356.3-201ENST00000623005 461 ntBASIC6.14□□□□□ -1.43
UPF2Q9HAU5 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
UPF2Q9HAU5 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
UPF2Q9HAU5 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
UPF2Q9HAU5 DDX18P5-201ENST00000534547 1306 ntBASIC6.14□□□□□ -1.43
UPF2Q9HAU5 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC6.14□□□□□ -1.43
UPF2Q9HAU5 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC6.14□□□□□ -1.43
UPF2Q9HAU5 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
UPF2Q9HAU5 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.14□□□□□ -1.43
UPF2Q9HAU5 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.13□□□□□ -1.43
UPF2Q9HAU5 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
UPF2Q9HAU5 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
UPF2Q9HAU5 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
UPF2Q9HAU5 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
UPF2Q9HAU5 RNA5SP339-201ENST00000390987 122 ntBASIC6.13□□□□□ -1.43
UPF2Q9HAU5 RN7SKP240-201ENST00000410583 375 ntBASIC6.13□□□□□ -1.43
UPF2Q9HAU5 CKS1BP6-201ENST00000424932 240 ntBASIC6.13□□□□□ -1.43
UPF2Q9HAU5 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
UPF2Q9HAU5 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.13□□□□□ -1.43
UPF2Q9HAU5 DNAJA1P5-201ENST00000440278 943 ntBASIC6.13□□□□□ -1.43
UPF2Q9HAU5 AL390119.1-201ENST00000440329 312 ntBASIC6.13□□□□□ -1.43
UPF2Q9HAU5 RANP1-206ENST00000455094 651 ntBASIC6.13□□□□□ -1.43
UPF2Q9HAU5 AC100832.1-201ENST00000471945 383 ntBASIC6.13□□□□□ -1.43
UPF2Q9HAU5 RN7SL591P-201ENST00000496150 292 ntBASIC6.13□□□□□ -1.43
UPF2Q9HAU5 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.13□□□□□ -1.43
UPF2Q9HAU5 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
UPF2Q9HAU5 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
UPF2Q9HAU5 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
UPF2Q9HAU5 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
UPF2Q9HAU5 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.13□□□□□ -1.43
UPF2Q9HAU5 AL390726.5-202ENST00000564800 256 ntBASIC6.13□□□□□ -1.43
UPF2Q9HAU5 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
UPF2Q9HAU5 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.13□□□□□ -1.43
UPF2Q9HAU5 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.13□□□□□ -1.43
UPF2Q9HAU5 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.13□□□□□ -1.43
UPF2Q9HAU5 RNF138P2-201ENST00000603490 592 ntBASIC6.13□□□□□ -1.43
UPF2Q9HAU5 SAMMSON-209ENST00000641222 1100 ntBASIC6.13□□□□□ -1.43
UPF2Q9HAU5 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
UPF2Q9HAU5 AC120036.2-201ENST00000509729 1474 ntBASIC6.13□□□□□ -1.43
UPF2Q9HAU5 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.13□□□□□ -1.43
UPF2Q9HAU5 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC6.13□□□□□ -1.43
UPF2Q9HAU5 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
UPF2Q9HAU5 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
UPF2Q9HAU5 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
UPF2Q9HAU5 CXADRP1-201ENST00000398098 1095 ntBASIC6.12□□□□□ -1.43
UPF2Q9HAU5 SDHDP6-201ENST00000414693 480 ntBASIC6.12□□□□□ -1.43
UPF2Q9HAU5 FABP7P2-201ENST00000429946 379 ntBASIC6.12□□□□□ -1.43
UPF2Q9HAU5 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.12□□□□□ -1.43
UPF2Q9HAU5 AC092162.1-201ENST00000432828 434 ntBASIC6.12□□□□□ -1.43
UPF2Q9HAU5 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.12□□□□□ -1.43
UPF2Q9HAU5 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.12□□□□□ -1.43
UPF2Q9HAU5 AL691482.1-201ENST00000453255 87 ntBASIC6.12□□□□□ -1.43
UPF2Q9HAU5 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
UPF2Q9HAU5 Z92846.1-201ENST00000456203 268 ntBASIC6.12□□□□□ -1.43
UPF2Q9HAU5 AC007688.1-201ENST00000475592 759 ntBASIC6.12□□□□□ -1.43
UPF2Q9HAU5 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC6.12□□□□□ -1.43
UPF2Q9HAU5 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.12□□□□□ -1.43
UPF2Q9HAU5 RN7SKP70-201ENST00000516655 271 ntBASIC6.12□□□□□ -1.43
UPF2Q9HAU5 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.12□□□□□ -1.43
UPF2Q9HAU5 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.12□□□□□ -1.43
UPF2Q9HAU5 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.12□□□□□ -1.43
UPF2Q9HAU5 AL499605.1-201ENST00000604628 403 ntBASIC6.12□□□□□ -1.43
UPF2Q9HAU5 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.12□□□□□ -1.43
UPF2Q9HAU5 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.12□□□□□ -1.43
UPF2Q9HAU5 CXADRP3-202ENST00000617265 1100 ntBASIC6.12□□□□□ -1.43
UPF2Q9HAU5 MIR8080-201ENST00000622224 89 ntBASIC6.12□□□□□ -1.43
UPF2Q9HAU5 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
UPF2Q9HAU5 AC132825.8-201ENST00000640783 297 ntBASIC6.12□□□□□ -1.43
UPF2Q9HAU5 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
UPF2Q9HAU5 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.12□□□□□ -1.43
UPF2Q9HAU5 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
UPF2Q9HAU5 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms